RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PCDHB1Q9Y5F3 818 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 PCDHGB6Q9Y5F9 930 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 PCDHGA6Q9Y5G7 932 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 PCDHGA5Q9Y5G8 931 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 PUS1Q9Y606 427 aaKnown RBP eCLIP3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 ZFP37Q9Y6Q3 630 aaPredicted RBP3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 MRC1P22897 1456 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 CD163L1Q9NR16 1453 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 PLCH1Q4KWH8 1693 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 KIF1BO60333 1816 aa3.51□□□□□ -1.85
CLNS1A-209ENST00000527299 NALCNQ8IZF0 1738 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ARHGAP5Q13017 1502 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 MROH2AA6NES4 1674 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 DOCK2Q92608 1830 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A087X0B3 334 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A087X0T9 212 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ATP6AP2A0A1C7CYW4 349 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A1W2PPL8 197 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 TCRBV3S1A0A5B6 114 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 XKRY2A2RUG3 117 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 BTBD17A6NE02 478 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 C5orf52A6NGY3 159 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 LRRC14BA6NHZ5 514 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ASB14A6NK59 587 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM74A7A6NL05 159 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PP2D1A8MPX8 630 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ZNF99A8MXY4 864 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 FOXO6A8MYZ6 492 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 TISP43B9A030 160 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ANKRD63C9JTQ0 380 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 H3BQ06 376 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 AIPO00170 330 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PGRMC2O15173 223 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ADAMDEC1O15204 470 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PAPSS1O43252 624 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 NUDT21O43809 227 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 HCN1O60741 890 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 CTNSO60931 367 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 SDC3O75056 442 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 GLRA3O75311 464 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 SEC22BO75396 215 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 KRT33AO76009 404 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 SRP72O76094 671 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 SORBS2O94875 1100 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 WDR47O94967 919 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 NXPH2O95156 264 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 GADD45GO95257 159 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PDE8BO95263 885 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 MT-CYBP00156 380 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 GSRP00390 522 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 LALBAP00709 142 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 C9P02748 559 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 GUSBP08236 651 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 H2AFZP0C0S5 128 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 IQCF3P0C7M6 154 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ODC1P11926 461 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 TSHRP16473 764 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ANXA7P20073 488 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 CYP2B6P20813 491 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 C4BPBP20851 252 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 RPS3P23396 243 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 MYL9P24844 172 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ITGA3P26006 1051 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 IVDP26440 423 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 MPIP34949 423 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 BRCC3P46736 316 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 RFX2P48378 723 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 HSPA7P48741 367 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 LHX1P48742 406 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 NUMBP49757 651 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 RGS6P49758 472 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 XKP51811 444 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ARPP19P56211 112 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 YBEYP58557 167 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 RAB5BP61020 215 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PSME3P61289 254 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 SNRPD2P62316 118 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ADARB1P78563 741 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 E2F1Q01094 437 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ZNF155Q12901 538 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PRKAA1Q13131 559 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 GPR17Q13304 367 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 PICALMQ13492 652 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 TDGQ13569 410 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 EXOSC2Q13868 293 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 BAATQ14032 418 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 CTTNQ14247 550 aaKnown RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 GUCA2BQ16661 112 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 TKFCQ3LXA3 575 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 HSDL1Q3SXM5 330 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 BCL7AQ4VC05 210 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM74A3Q4VXF1 159 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 CCDC157Q569K6 752 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 TPRG1LQ5T0D9 272 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 AVPI1Q5T686 147 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 DCAF12L1Q5VU92 463 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 HACD4Q5VWC8 232 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 ARHGAP17Q68EM7 881 aa3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 RGS7BPQ6MZT1 257 aaPredicted RBP3.5□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM199XQ6PEV8 388 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms