RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 UBE2FQ969M7 185 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ACTRT3Q9BYD9 372 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ACAD8Q9UKU7 415 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 SOX1O00570 391 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 TRMUO75648 421 aaKnown RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ST6GAL1P15907 406 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 DCKP27707 260 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 GGT2P36268 569 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 VSX2P58304 361 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ROR2Q01974 943 aaKnown RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 PROX2Q3B8N5 592 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ZNF770Q6IQ21 691 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ENTHD1Q8IYW4 607 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 CADM4Q8NFZ8 388 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 ZNF420Q8TAQ5 688 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-214ENST00000522165 COL26A1Q96A83 441 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 PCED1AQ9H1Q7 454 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 SLC24A3Q9HC58 644 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 TPRKBQ9Y3C4 175 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 SNX5Q9Y5X3 404 aa24.3■■□□□ 1.48
COL13A1-214ENST00000522165 TRBV4-1A0A0J9YWV2 114 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 PCDHGA12O60330 932 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 SEC14L2O76054 403 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 MAOBP27338 520 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 COL9A2Q14055 689 aaPredicted RBP24.29■■□□□ 1.48
COL13A1-214ENST00000522165 DUSP21Q9H596 190 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 FAM60AQ9NP50 221 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 RASSF1Q9NS23 344 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 WNT16Q9UBV4 365 aa24.29■■□□□ 1.48
COL13A1-214ENST00000522165 A0A1W2PPC1 479 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 HCRTR1O43613 425 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 WBP4O75554 376 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 FOXD4Q12950 439 aaPredicted RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 C6orf132Q5T0Z8 1188 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 GPR107Q5VW38 600 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 FAM111BQ6SJ93 734 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 IQCHQ86VS3 1027 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 PARP8Q8N3A8 854 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 AQP11Q8NBQ7 271 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 SHDQ96IW2 340 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 CCDC3Q9BQI4 270 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 SCN3BQ9NY72 215 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 FBXL21Q9UKT6 434 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 LIPT1Q9Y234 373 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 TLR4O00206 839 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 GALR3O60755 368 aaPredicted RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 EPPINO95925 133 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 CPMP14384 443 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 RACK1P63244 317 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 SLC35A2P78381 396 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 TUBA3CQ13748 450 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 SMN1Q16637 294 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 GTF2IRD2BQ6EKJ0 949 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 GTF2IRD2Q86UP8 949 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 ERI1Q8IV48 349 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 APH1BQ8WW43 257 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 GTPBP3Q969Y2 492 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 C12orf43Q96C57 262 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 MS4A4EQ96PG1 132 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 TRNT1Q96Q11 434 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 DOK1Q99704 481 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 LHPPQ9H008 270 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 LIN28AQ9H9Z2 209 aaKnown RBP24.28■■□□□ 1.48
COL13A1-214ENST00000522165 RNF6Q9Y252 685 aa24.28■■□□□ 1.48
COL13A1-214ENST00000522165 M0R3H8 397 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 LGI1O95970 557 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 GASTP01350 101 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 H1F0P07305 194 aaKnown RBP24.27■■□□□ 1.48
COL13A1-214ENST00000522165 POU2F1P14859 743 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 PCMT1P22061 227 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 ELAVL4P26378 380 aaKnown RBP24.27■■□□□ 1.48
COL13A1-214ENST00000522165 FASLGP48023 281 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 HMGN2P46Q86SG4 172 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 GKN2Q86XP6 184 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 SHISA5Q8N114 240 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 GJD3Q8N144 294 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 OR2L13Q8N349 312 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 ARL14Q8N4G2 192 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 LMX1AQ8TE12 382 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 SLC38A1Q9H2H9 487 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 IL21RQ9HBE5 538 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 STARD5Q9NSY2 213 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 GIN1Q9NXP7 522 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 TMCC3Q9ULS5 477 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 SLC9A8Q9Y2E8 581 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 SPACA6W5XKT8 324 aa24.27■■□□□ 1.48
COL13A1-214ENST00000522165 CYR61O00622 381 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 NME6O75414 186 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-214ENST00000522165 UBXN7O94888 489 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 PORP16435 677 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-214ENST00000522165 CDH3P22223 829 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 KRT20P35900 424 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 GSSP48637 474 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 FGD3Q5JSP0 725 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 MFSD12Q6NUT3 480 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 C19orf47Q8N9M1 422 aaKnown RBP24.26■■□□□ 1.47
COL13A1-214ENST00000522165 AVL9Q8NBF6 648 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 OR5T3Q8NGG3 340 aa24.26■■□□□ 1.47
COL13A1-214ENST00000522165 SLC35A4Q96G79 324 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms