RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 MED12LQ86YW9 2145 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 ZNF615Q8N8J6 731 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 LRRN4CLQ8ND94 238 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 UBTD2Q8WUN7 234 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 WNT2BQ93097 391 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 INTS12Q96CB8 462 aaKnown RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 Q96MF0 132 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 UCN2Q96RP3 112 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 RBBP8Q99708 897 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 DDX31Q9H8H2 851 aaKnown RBP14.34□□□□□ -0.11
LMNA-223ENST00000515459 PCDHGA11Q9Y5H2 935 aa14.34□□□□□ -0.11
LMNA-223ENST00000515459 MED12Q93074 2177 aa14.33□□□□□ -0.11
LMNA-223ENST00000515459 ARID1AO14497 2285 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 A8MXE2 369 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 CXorf49A8MYA2 514 aaPredicted RBP14.33□□□□□ -0.12
LMNA-223ENST00000515459 SNPHO15079 494 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 TP73O15350 636 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 CT62P0C5K7 136 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 NAGAP17050 411 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 EEF1A1P68104 462 aaKnown RBP14.33□□□□□ -0.12
LMNA-223ENST00000515459 SRYQ05066 204 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 CUL3Q13618 768 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 C6orf163Q5TEZ5 329 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 EEF1A1P5Q5VTE0 462 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 LIPJQ5W064 366 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 SLC30A6Q6NXT4 461 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 TMEM81Q6P7N7 255 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 ADGRE4PQ86SQ3 457 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 ISCA2Q86U28 154 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 NUDT13Q86X67 352 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 KLHL7Q8IXQ5 586 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 GCNT2Q8N0V5 402 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 UCN3Q969E3 161 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 REPS1Q96D71 796 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 CPNE1Q99829 537 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 PACSIN3Q9UKS6 424 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 TESMINQ9Y4I5 508 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 ANGPTL3Q9Y5C1 460 aa14.33□□□□□ -0.12
LMNA-223ENST00000515459 A0A1W2PS29 197 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 H0YIV9 168 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 UBXN8O00124 270 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 SMAD7O15105 426 aaKnown RBP14.32□□□□□ -0.12
LMNA-223ENST00000515459 PGRMC2O15173 223 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 KERAO60938 352 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 ICOSLGO75144 302 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 PPM1BO75688 479 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 CBR3O75828 277 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 RHOXF2BP0C7M4 288 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 FPR1P21462 350 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 CHMP24386 653 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 SSTR1P30872 391 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 CPOXP36551 454 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 PPP2R2BQ00005 443 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 YTHDF3Q7Z739 585 aaKnown RBP14.32□□□□□ -0.12
LMNA-223ENST00000515459 TRIM42Q8IWZ5 723 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 TEX9Q8N6V9 391 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 OR7G1Q8NGA0 311 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 OR14L1PQ8NHC6 308 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 PYROXD1Q8WU10 500 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 ATOH8Q96SQ7 321 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 OSBPL11Q9BXB4 747 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 TRIM31Q9BZY9 425 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 NXF5Q9H1B4 397 aaKnown RBP14.32□□□□□ -0.12
LMNA-223ENST00000515459 ACTR8Q9H981 624 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 NMRAL1Q9HBL8 299 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 C6orf203Q9P0P8 240 aaPredicted RBP14.32□□□□□ -0.12
LMNA-223ENST00000515459 CLCF1Q9UBD9 225 aa14.32□□□□□ -0.12
LMNA-223ENST00000515459 CTIFO43310 598 aaKnown RBP14.31□□□□□ -0.12
LMNA-223ENST00000515459 GPX3P22352 226 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 GMPRP36959 345 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 GP5P40197 560 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 CBLBQ13191 982 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 SNTA1Q13424 505 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 KBTBD12Q3ZCT8 623 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 PLXDC2Q6UX71 529 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 RAPH1Q70E73 1250 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 NUP54Q7Z3B4 507 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 IFNEQ86WN2 208 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 OR4K14Q8NGD5 310 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 SPATA3Q8NHX4 192 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 NODALQ96S42 347 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 CCL19Q99731 98 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 G6PC3Q9BUM1 346 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 OR2B2Q9GZK3 357 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 SERHLQ9NQF3 203 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 PSD3Q9NYI0 1048 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 ZNF226Q9NYT6 803 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 KLRF1Q9NZS2 232 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 MAPRE3Q9UPY8 281 aa14.31□□□□□ -0.12
LMNA-223ENST00000515459 EXO1Q9UQ84 846 aaKnown RBP14.31□□□□□ -0.12
LMNA-223ENST00000515459 C2orf72A6NCS6 295 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 DEFB108AA8MXU0 73 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 INAFM1C9JVW0 142 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 MSTNO14793 375 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 UGDHO60701 494 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 GBAP04062 536 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 CPMP14384 443 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 TCP1P17987 556 aaKnown RBP14.3□□□□□ -0.12
LMNA-223ENST00000515459 NT5EP21589 574 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms