RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SPPL2AQ8TCT8 520 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 SLC44A1Q8WWI5 657 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 TMEM158Q8WZ71 300 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 TANKQ92844 425 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 UCN3Q969E3 161 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 TP53INP1Q96A56 240 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 PPWD1Q96BP3 646 aaKnown RBP12.67□□□□□ -0.38
SPCS3-204ENST00000513139 RHBDF1Q96CC6 855 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 MRRFQ96E11 262 aaKnown RBP12.67□□□□□ -0.38
SPCS3-204ENST00000513139 WDR34Q96EX3 536 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 TMEM41AQ96HV5 264 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 TUBA1CQ9BQE3 449 aa12.67□□□□□ -0.38
SPCS3-204ENST00000513139 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
SPCS3-204ENST00000513139 TMCC2O75069 709 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 ALOX15P16050 662 aaPredicted RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 HIST1H1TP22492 207 aaPredicted RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 GCKP35557 465 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 SOX18P35713 384 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 CASP3P42574 277 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 KRTAP1-1Q07627 177 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 LAPTM5Q13571 262 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 TOMM20Q15388 145 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 AP5B1Q2VPB7 878 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 WIPI1Q5MNZ9 446 aaPredicted RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 BICRALQ6AI39 1079 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 TIGD3Q6B0B8 471 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 ADNP2Q6IQ32 1131 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 HEPHL1Q6MZM0 1159 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 HMBOX1Q6NT76 420 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 DGAT2L6Q6ZPD8 337 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 ADAMTSL2Q86TH1 951 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 CTAGE3PQ8IX95 158 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 OR4N5Q8IXE1 308 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 PPM1NQ8N819 430 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 FAM83FQ8NEG4 500 aaPredicted RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 IGFBPL1Q8WX77 278 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 INTS12Q96CB8 462 aaKnown RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 PTCD3Q96EY7 689 aaKnown RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 PIK3IP1Q96FE7 263 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 VPS39Q96JC1 886 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 MS4A8Q9BY19 250 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 RPF2Q9H7B2 306 aaKnown RBP12.66□□□□□ -0.38
SPCS3-204ENST00000513139 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 SNX15Q9NRS6 342 aa12.66□□□□□ -0.38
SPCS3-204ENST00000513139 NPEPPSL1A6NEC2 478 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 CLGNO14967 610 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 RIPK2O43353 540 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 PRAMEF4O60810 478 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 PTPN6P29350 595 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 STX2P32856 288 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 GALNSP34059 522 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 GGT5P36269 586 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 FBXW4P57775 412 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 HERVK_113P63132 956 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 ERVK-8P63133 956 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 PCDH1Q08174 1060 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 DOC2AQ14183 400 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 C18orf21Q32NC0 220 aaPredicted RBP12.65□□□□□ -0.38
SPCS3-204ENST00000513139 PAGE2BQ5JRK9 111 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 PRAMEF9Q5VWM5 478 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 ENPP6Q6UWR7 440 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 PLEKHM3Q6ZWE6 761 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 FRA10AC1Q70Z53 315 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 TRMT10CQ7L0Y3 403 aaKnown RBP12.65□□□□□ -0.38
SPCS3-204ENST00000513139 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 AENQ8WTP8 325 aaKnown RBP12.65□□□□□ -0.38
SPCS3-204ENST00000513139 MARK4Q96L34 752 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 MED18Q9BUE0 208 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 ERVK-6Q9BXR3 956 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.38
SPCS3-204ENST00000513139 ZNF701Q9NV72 531 aaPredicted RBP12.65□□□□□ -0.38
SPCS3-204ENST00000513139 DNAJC11Q9NVH1 559 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 TEX10Q9NXF1 929 aaPredicted RBP12.65□□□□□ -0.38
SPCS3-204ENST00000513139 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 CLCF1Q9UBD9 225 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 RAB21Q9UL25 225 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 ERVK-19Q9WJR5 959 aa12.65□□□□□ -0.38
SPCS3-204ENST00000513139 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 C2orf92A0A1B0GVN3 265 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 H0Y3Z8 333 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 TNFSF13O75888 250 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 SOX30O94993 753 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 CRHP06850 196 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 PHBP35232 272 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 CPOXP36551 454 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 SSR2P43308 183 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 DMTNQ08495 405 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 FAM27E3Q08E93 113 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 SLC29A2Q14542 456 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 HIST2H2ACQ16777 129 aaPredicted RBP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 CDKL4Q5MAI5 379 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 HIST2H2AA3Q6FI13 130 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 DESI1Q6ICB0 168 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 TMEM81Q6P7N7 255 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 ZC3HC1Q86WB0 502 aaKnown RBP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 GCNT2Q8N0V5 402 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms