RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 GATAD2AQ86YP4 633 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 CCDC71Q8IV32 467 aaPredicted RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 SLC5A8Q8N695 610 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 LINC01555Q8NAE3 123 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 ZNF540Q8NDQ6 660 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 OR9Q2Q8NGE9 314 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 OR52N2Q8NGI0 321 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 OR5K2Q8NHB8 316 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D15Q8TC07 691 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 UTP15Q8TED0 518 aaKnown RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 SETD7Q8WTS6 366 aaKnown RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 ZFPM2Q8WW38 1151 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 WDR34Q96EX3 536 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 CSF3RQ99062 836 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 C17orf62Q9BQA9 187 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 FUNDC2Q9BWH2 189 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 TRIT1Q9H3H1 467 aaKnown RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 PRDM8Q9NQV8 689 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 C1GALT1Q9NS00 363 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 TEX10Q9NXF1 929 aaPredicted RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 KCNN3Q9UGI6 736 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 ZFR2Q9UPR6 939 aaKnown RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 CORO2BQ9UQ03 480 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 POLHQ9Y253 713 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 CORINQ9Y5Q5 1042 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3DA0A087WVF3 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3IA0A087WXS9 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3EA0A087X179 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3KA0A087X1G2 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 A0A1W2PQU0 124 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3FA6NER0 549 aaPredicted RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3LB9A6J9 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 FAM227AF5H4B4 570 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PRAMEF10O60809 474 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 UGT2B11O75310 529 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 BCL10O95999 233 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 SEMG1P04279 462 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3HP0C7X1 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PCSK2P16519 638 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PSMB9P28065 219 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 GSTM2P28161 218 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 HTR1BP28222 390 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 GRK6P43250 576 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 NUDT6P53370 316 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 CTAG1AP78358 180 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 IFITM2Q01629 132 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 NFATC3Q12968 1075 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 GNA13Q14344 377 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 IFI44LQ53G44 452 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 SNAP47Q5SQN1 464 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3GQ6DHY5 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3CQ6IPX1 549 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 CEACAM20Q6UY09 585 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 SNX29P2Q8IUI4 249 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TBC1D3Q8IZP1 549 aaPredicted RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 NLGN4XQ8N0W4 816 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 GTPBP3Q969Y2 492 aaKnown RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 MAP6Q96JE9 813 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 EDEM2Q9BV94 578 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 NLNQ9BYT8 704 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 MAPRE3Q9UPY8 281 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 CA5BQ9Y2D0 317 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TRIOO75962 3097 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TMPRSS11DO60235 418 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 SEC14L2O76054 403 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 ALX3O95076 343 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 MT-ND2P03891 347 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 BCHEP06276 602 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 GNSP15586 552 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 CCR8P51685 355 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 AFF3P51826 1226 aaKnown RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 PRKAG1P54619 331 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PDE7AQ13946 482 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 UBXN2BQ14CS0 331 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 DUSP7Q16829 419 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 EXOC3L2Q2M3D2 409 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 ATAD3BQ5T9A4 648 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 KIAA1614Q5VZ46 1190 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PIWIL3Q7Z3Z3 882 aaKnown RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 SLC51BQ86UW2 128 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 IGFN1Q86VF2 1251 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 SAMD14Q8IZD0 417 aaPredicted RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 LGI4Q8N135 537 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 SETD9Q8NE22 299 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 OR4C6Q8NH72 309 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 ZNF420Q8TAQ5 688 aaPredicted RBP6.62□□□□□ -1.35
HERC4-211ENST00000492996 SMPDL3AQ92484 453 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TM4SF18Q96CE8 201 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 DEPDC7Q96QD5 511 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 APOL4Q9BPW4 351 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 DUSP23Q9BVJ7 150 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 AHSPQ9NZD4 102 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 PCDHGA6Q9Y5G7 932 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 LYVE1Q9Y5Y7 322 aa6.62□□□□□ -1.35
HERC4-211ENST00000492996 TRBC2A0A5B9 178 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 C5orf58C9J3I9 102 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 PCDH17O14917 1159 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 NME6O75414 186 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 ERAL1O75616 437 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms