RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PDPK1O15530 556 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 PLOD3O60568 738 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 RASAL1O95294 804 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 LBPP18428 481 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 SOX18P35713 384 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 FOXK1P85037 733 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 IGFBP7Q16270 282 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 HSP90B2PQ58FF3 399 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 FAM180AQ6UWF9 173 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 LARP4Q71RC2 724 aaKnown RBP eCLIP19.34■□□□□ 0.69
SEC13-217ENST00000482647 ZNF441Q8N8Z8 693 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 ADIPOR1Q96A54 375 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 MIB2Q96AX9 1013 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 ZBED6CLQ96FA7 236 aaPredicted RBP19.34■□□□□ 0.69
SEC13-217ENST00000482647 SGCZQ96LD1 299 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 C7orf26Q96N11 449 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 GLIPR2Q9H4G4 154 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 ASF1BQ9NVP2 202 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 CPAMD8Q8IZJ3 1885 aa19.34■□□□□ 0.69
SEC13-217ENST00000482647 SDHDO14521 159 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 SCAMP2O15127 329 aaKnown RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 NME2P1O60361 137 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 ZNF354AO60765 605 aaPredicted RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 GPX3P22352 226 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 NME2P22392 152 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 NR0B1P51843 470 aaKnown RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 NRG3P56975 720 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 DUSP8Q13202 625 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 CPTPQ5TA50 214 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 GALNTL5Q7Z4T8 443 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 ATCAYQ86WG3 371 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 DND1Q8IYX4 353 aaKnown RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 BCORP1Q8N888 145 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 ZFP28Q8NHY6 868 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 GRHL3Q8TE85 626 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 CIDECQ96AQ7 238 aaPredicted RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 BARD1Q99728 777 aaKnown RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 HES7Q9BYE0 225 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 ACSS1Q9NUB1 689 aaPredicted RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 ATAD3AQ9NVI7 634 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 MAPRE3Q9UPY8 281 aa19.33■□□□□ 0.68
SEC13-217ENST00000482647 KLF13Q9Y2Y9 288 aaPredicted RBP19.33■□□□□ 0.68
SEC13-217ENST00000482647 A0A087WV62 115 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 PLOD2O00469 737 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 ATP8B1O43520 1251 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 NADKO95544 446 aaPredicted RBP19.32■□□□□ 0.68
SEC13-217ENST00000482647 CRYABP02511 175 aaKnown RBP19.32■□□□□ 0.68
SEC13-217ENST00000482647 EMDP50402 254 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 DIO3P55073 304 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 MANFP55145 182 aaKnown RBP19.32■□□□□ 0.68
SEC13-217ENST00000482647 CLDN8P56748 225 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 DCAF7P61962 342 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 ZNF385BQ569K4 471 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 OGFOD2Q6N063 350 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 TMEM107Q6UX40 140 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 RTL4Q6ZR62 310 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 MDGA2Q7Z553 956 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 KRTCAP2Q8N6L1 136 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 NATD1Q8N6N6 113 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 FAM98AQ8NCA5 519 aaKnown RBP19.32■□□□□ 0.68
SEC13-217ENST00000482647 SIMC1Q8NDZ2 872 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 OR7G2Q8NG99 324 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 OR7A2PQ8NGA2 310 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 DNAJB8Q8NHS0 232 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 ELP4Q96EB1 424 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 TAAR6Q96RI8 345 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 WDR55Q9H6Y2 383 aaPredicted RBP19.32■□□□□ 0.68
SEC13-217ENST00000482647 ANKRA2Q9H9E1 313 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 TAS2R9Q9NYW1 312 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 VPS4AQ9UN37 437 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 NTNG1Q9Y2I2 539 aa19.32■□□□□ 0.68
SEC13-217ENST00000482647 CAPN14A8MX76 684 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 KLRC4-KLRK1H3BQV0 150 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 COQ9O75208 318 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 FBXO45P0C2W1 286 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 DRD5P21918 477 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 EPHA3P29320 983 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 GPC1P35052 558 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 MC3RP41968 323 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 C21orf58P58505 322 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 HSPB3Q12988 150 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 ZNF791Q3KP31 576 aaPredicted RBP19.31■□□□□ 0.68
SEC13-217ENST00000482647 FHL5Q5TD97 284 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 ZNF551Q7Z340 670 aaPredicted RBP19.31■□□□□ 0.68
SEC13-217ENST00000482647 SPATA19Q7Z5L4 167 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 RIMKLAQ8IXN7 391 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 GOLM1Q8NBJ4 401 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 FAR1Q8WVX9 515 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 CKAP2Q8WWK9 683 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 COQ8BQ96D53 544 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 SPACA9Q96E40 222 aaPredicted RBP19.31■□□□□ 0.68
SEC13-217ENST00000482647 LCORQ96JN0 433 aaPredicted RBP19.31■□□□□ 0.68
SEC13-217ENST00000482647 MAGEB18Q96M61 343 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 ITPAQ9BY32 194 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 DDX18Q9NVP1 670 aaKnown RBP19.31■□□□□ 0.68
SEC13-217ENST00000482647 C19orf53Q9UNZ5 99 aaPredicted RBP19.31■□□□□ 0.68
SEC13-217ENST00000482647 DTX4Q9Y2E6 619 aa19.31■□□□□ 0.68
SEC13-217ENST00000482647 FASNP49327 2511 aaKnown RBP19.3■□□□□ 0.68
SEC13-217ENST00000482647 GOLGA8QA0A0J9YX86 632 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 GOLGA8OA6NCC3 632 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms