RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SLCO1A2P46721 670 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 FUT7Q11130 342 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 DDX39BQ13838 428 aaKnown RBP11.46□□□□□ -0.57
SKA3-206ENST00000475251 OR2A2Q6IF42 318 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 NUP54Q7Z3B4 507 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 ADGRE4PQ86SQ3 457 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 IFNEQ86WN2 208 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 GRAMD2AQ8IUY3 354 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 OR7G1Q8NGA0 311 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 OR14L1PQ8NHC6 308 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 HUS1BQ8NHY5 278 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 STAG3L4Q8TBR4 150 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 DOK4Q8TEW6 326 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 SLC44A1Q8WWI5 657 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 NANOS1Q8WY41 292 aaKnown RBP11.46□□□□□ -0.57
SKA3-206ENST00000475251 CDKL2Q92772 493 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 PIK3IP1Q96FE7 263 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 MED18Q9BUE0 208 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 OSBPL11Q9BXB4 747 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 GSX2Q9BZM3 304 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 OR10A5Q9H207 317 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 CXorf21Q9HAI6 301 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 NUDT4Q9NZJ9 180 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 KLRF1Q9NZS2 232 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 C6orf203Q9P0P8 240 aaPredicted RBP11.46□□□□□ -0.57
SKA3-206ENST00000475251 OPTCQ9UBM4 332 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 TRPS1Q9UHF7 1281 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 TSC22D4Q9Y3Q8 395 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 PCDHGA11Q9Y5H2 935 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 JMJD1CQ15652 2540 aa11.46□□□□□ -0.58
SKA3-206ENST00000475251 HIVEP2P31629 2446 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 TRIM64A6NGJ6 449 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 GLOD5A6NK44 160 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 K7EPI3 171 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 PPM1BO75688 479 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 CNOT4O95628 575 aaKnown RBP11.45□□□□□ -0.58
SKA3-206ENST00000475251 FAM58BPP0C7Q3 252 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 CRYGSP22914 178 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 ABCD3P28288 659 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 SRYQ05066 204 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 OR4D1Q15615 310 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 LIPJQ5W064 366 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 MRM1Q6IN84 353 aaKnown RBP11.45□□□□□ -0.58
SKA3-206ENST00000475251 CHMP1BQ7LBR1 199 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 P4HA3Q7Z4N8 544 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 NUDT13Q86X67 352 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 MYLK4Q86YV6 388 aaPredicted RBP11.45□□□□□ -0.58
SKA3-206ENST00000475251 ANKMY2Q8IV38 441 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 TRIM42Q8IWZ5 723 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 GCNT2Q8N0V5 402 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 SPATA6LQ8N4H0 392 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 FBXO36Q8NEA4 188 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 EXT2Q93063 718 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 ADIPOR1Q96A54 375 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 FAM111AQ96PZ2 611 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 SLC39A3Q9BRY0 314 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 OR2B2Q9GZK3 357 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 DDX47Q9H0S4 455 aaKnown RBP11.45□□□□□ -0.58
SKA3-206ENST00000475251 DDX31Q9H8H2 851 aaKnown RBP11.45□□□□□ -0.58
SKA3-206ENST00000475251 CLCF1Q9UBD9 225 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 EXO1Q9UQ84 846 aaKnown RBP11.45□□□□□ -0.58
SKA3-206ENST00000475251 ASB4Q9Y574 426 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 ANGPTL3Q9Y5C1 460 aa11.45□□□□□ -0.58
SKA3-206ENST00000475251 A0A0A6YYD5 115 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 A0A1W2PNV4 684 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 A0A1W2PR48 441 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 DEFB108AA8MXU0 73 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 PHGDHO43175 533 aaKnown RBP11.44□□□□□ -0.58
SKA3-206ENST00000475251 TMCC2O75069 709 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
SKA3-206ENST00000475251 AIFM1O95831 613 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 ABCB1P08183 1280 aaPredicted RBP11.44□□□□□ -0.58
SKA3-206ENST00000475251 IVDP26440 423 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 SOX18P35713 384 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 CD79BP40259 229 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 PDIA2Q13087 525 aaKnown RBP11.44□□□□□ -0.58
SKA3-206ENST00000475251 CBLBQ13191 982 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 CUL3Q13618 768 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 PRR22Q8IZ63 422 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 ZNF615Q8N8J6 731 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 UBTD2Q8WUN7 234 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 WFIKKN1Q96NZ8 548 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 OSBPL9Q96SU4 736 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 MTERF1Q99551 399 aaKnown RBP11.44□□□□□ -0.58
SKA3-206ENST00000475251 MCMBPQ9BTE3 642 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 CAB39LQ9H9S4 337 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 KLHL28Q9NXS3 571 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 PSD3Q9NYI0 1048 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 ELOVL5Q9NYP7 299 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 MAPRE3Q9UPY8 281 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 DLGAP4Q9Y2H0 992 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 PPP2R2CQ9Y2T4 447 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 MTO1Q9Y2Z2 717 aaKnown RBP11.44□□□□□ -0.58
SKA3-206ENST00000475251 CSPG4Q6UVK1 2322 aa11.44□□□□□ -0.58
SKA3-206ENST00000475251 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 SUPT3HB4E1H0 165 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 H0YIV9 168 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 PLOD2O00469 737 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 ACOX3O15254 700 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms