RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TOR1AIP1Q5JTV8 583 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 C12orf73Q69YU5 71 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 MMAAQ8IVH4 418 aaKnown RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 ZNF557Q8N988 423 aaPredicted RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 OR2L2Q8NH16 312 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 GPA33Q99795 319 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 MS4A8Q9BY19 250 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 NEUROD4Q9HD90 331 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 SIRT3Q9NTG7 399 aaPredicted RBP12.2□□□□□ -0.46
SHC1-210ENST00000448116 P2RX2Q9UBL9 471 aa12.2□□□□□ -0.46
SHC1-210ENST00000448116 CXorf51AA0A1B0GTR3 108 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ABHD14A-ACY1A0A1B0GW23 586 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ARRDC5A6NEK1 342 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 FAM47E-STBD1D6RA91 191 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 SCAMP1O15126 338 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 SPINT1O43278 529 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 LATO43561 262 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NTN1O95631 604 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 PCCBP05166 539 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NR2F6P10588 404 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NCBP2P52298 156 aaKnown RBP eCLIP12.19□□□□□ -0.463e-8■■■□□ 15.1
SHC1-210ENST00000448116 SLAMF1Q13291 335 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 GPR19Q15760 415 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 SYT14P1Q58G82 188 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 LHFPL3Q86UP9 236 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 SLC38A6Q8IZM9 456 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 DEPDC7Q96QD5 511 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 PRRG3Q9BZD7 231 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 A4GNTQ9UNA3 340 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 SLC9A8Q9Y2E8 581 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 DNMT3AQ9Y6K1 912 aaPredicted RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 HYKKA2RU49 373 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 MEIOCA2RUB1 952 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ANTXRLA6NF34 631 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 RAB36O95755 333 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 SLC6A11P48066 632 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 CCR8P51685 355 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 LCTLQ6UWM7 567 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NUDT13Q86X67 352 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 DCUN1D3Q8IWE4 304 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ZNF296Q8WUU4 475 aaPredicted RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 LRIG1Q96JA1 1093 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 DPH7Q9BTV6 452 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ZNF717Q9BY31 904 aaPredicted RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 MN1Q10571 1320 aaPredicted RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 CCDC182A6NF36 153 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NDUFS4O43181 175 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 LCMT2O60294 686 aaKnown RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 CLCNKAP51800 687 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 RPS25P62851 125 aaKnown RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 MLLT11Q13015 90 aaPredicted RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 ZNF77Q15935 545 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ZNF658BQ4V348 819 aaPredicted RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 SFTPA1Q8IWL2 248 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 RGMAQ96B86 450 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 QRFPRQ96P65 431 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 OR52A5Q9H2C5 316 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 ANKRA2Q9H9E1 313 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 FZD3Q9NPG1 666 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NDUFB11Q9NX14 153 aa12.19□□□□□ -0.46
SHC1-210ENST00000448116 NUFIP1Q9UHK0 495 aaKnown RBP12.19□□□□□ -0.46
SHC1-210ENST00000448116 MYO10Q9HD67 2058 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 HOXC5Q00444 222 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 TOMM20Q15388 145 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 OR8D1Q8WZ84 308 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 ZNF514Q96K75 400 aaPredicted RBP12.18□□□□□ -0.46
SHC1-210ENST00000448116 ZNF582Q96NG8 517 aaPredicted RBP12.18□□□□□ -0.46
SHC1-210ENST00000448116 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 PLA2G12AQ9BZM1 189 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 SRRQ9GZT4 340 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 DPEP2Q9H4A9 486 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 GLIPR2Q9H4G4 154 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 CNIH4Q9P003 139 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 SLC13A4Q9UKG4 626 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 FBXW2Q9UKT8 454 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 GPSM3Q9Y4H4 160 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 SEMA3DO95025 777 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 PAPLNO95428 1278 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 ADH5P11766 374 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 ADRB3P13945 408 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 CXCR2P25025 360 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 ATP6V1E1P36543 226 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 VIPR2P41587 438 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 GPR50Q13585 617 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 TCEA2Q15560 299 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 ANKRD33Q7Z3H0 272 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 TBC1D19Q8N5T2 526 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 RNFT2Q96EX2 444 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 KCTD7Q96MP8 289 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms