RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SCML2Q9UQR0 700 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ACTL7AQ9Y615 435 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ZP3P21754 424 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 EDNRBP24530 442 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 RPS12P25398 132 aaKnown RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 PSEN2P49810 448 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 ELAVL2Q12926 359 aaKnown RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 FAM69AQ5T7M9 428 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 FBXL22Q6P050 247 aa7.52□□□□□ -1.21
SMG1-202ENST00000446231 CPPED1Q9BRF8 314 aaPredicted RBP7.52□□□□□ -1.21
SMG1-202ENST00000446231 TCRBV5S1A1TA0A578 114 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SOX30O94993 753 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 TEKQ02763 1124 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SAXO2Q658L1 398 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SAMD7Q7Z3H4 446 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SLC6A17Q9H1V8 727 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 RBBP9O75884 186 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PRDX3P30048 256 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 Q3ZCU0 254 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MS4A15Q8N5U1 240 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ZNF676Q8N7Q3 588 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 OR51B5Q9H339 312 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 TCRBV5S2A0A599 114 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GABRB1P18505 474 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SLC5A12Q1EHB4 618 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GPR33Q49SQ1 333 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 OR6V1Q8N148 313 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 TM9SF4Q92544 642 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GPRC5BQ9NZH0 403 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 RPLP2P05387 115 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 SYN1P17600 705 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MTNR1AP48039 350 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 EIF2S3LQ2VIR3 472 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 RAB41Q5JT25 222 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 OR2T33Q8NG76 320 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GPR150Q8NGU9 434 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ZDHHC1Q8WTX9 485 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 S100A13Q99584 98 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 FZD7O75084 574 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 IFNA21P01568 189 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MAT2AP31153 395 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 PTPRRQ15256 657 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 TCEAL5Q5H9L2 206 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 APOOLQ6UXV4 268 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 NANPQ8TBE9 248 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 UPF1Q92900 1129 aaKnown RBP eCLIP7.51□□□□□ -1.213e-9■■■□□ 14.7
SMG1-202ENST00000446231 OR5M11Q96RB7 305 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 POT1Q9NUX5 634 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 A0A0D9SG52 128 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 D6RAR5 112 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PET100P0DJ07 73 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 FAM189BP81408 668 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 NPAS3Q8IXF0 933 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 XRN1Q8IZH2 1706 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 ZNF407Q9C0G0 2248 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GPR171O14626 319 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PSMB1P20618 241 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 AP1S1P61966 158 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 LASP1Q14847 261 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 DPF3Q92784 378 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 CDCA4Q9BXL8 241 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 OR6C75A6NL08 312 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GATBO75879 557 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 VAMP1P23763 118 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GABRA5P31644 462 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PAN3Q58A45 887 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 HBMQ6B0K9 141 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 OR52B6Q8NGF0 335 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 OR4Q3Q8NH05 313 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GABARAPL3Q9BY60 117 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ALPPL2P10696 532 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 WNT4P56705 351 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PAPD4Q6PIY7 484 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 ADGRF3Q8IZF5 1079 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 RGMAQ96B86 450 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MINDY3Q9H8M7 445 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SYNPO2LQ9H987 977 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 IMP3Q9NV31 184 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 SLC6A5Q9Y345 797 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 QSOX1O00391 747 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PGAM2P15259 253 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MGAT3Q09327 533 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 GRB14Q14449 540 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SLBPQ14493 270 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMG1-202ENST00000446231 TRIB2Q92519 343 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 RAB8BQ92930 207 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 VRK1Q99986 396 aaPredicted RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 ARHGAP39Q9C0H5 1083 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SPG21Q9NZD8 308 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MROH6A6NGR9 719 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ZNF670-ZNF695F2Z2N8 137 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 PPP3CBP16298 524 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ACVR1BP36896 505 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 SP140Q13342 867 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 CCDC190Q86UF4 302 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 MRPS31Q92665 395 aaKnown RBP7.51□□□□□ -1.21
SMG1-202ENST00000446231 CTPS2Q9NRF8 586 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 ENPP4Q9Y6X5 453 aa7.51□□□□□ -1.21
SMG1-202ENST00000446231 TRDV1A0A1B0GX56 115 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms