RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 A0A1W2PR48 441 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 E7ESA3 106 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 H0YIV9 168 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 HRKO00198 91 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ACOX3O15254 700 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRAMEF4O60810 478 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ABCB7O75027 752 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PPM1BO75688 479 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SMNDC1O75940 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CLDN9O95484 217 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 HRGP04196 525 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CRHP06850 196 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SSTR4P31391 388 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 HNRNPH2P55795 449 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 WNT3P56703 355 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FUT7Q11130 342 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 IFT88Q13099 833 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FGFBP1Q14512 234 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SLMAPQ14BN4 828 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 EIPR1Q53HC9 387 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CCNYL2Q5T2Q4 361 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRAMEF9Q5VWM5 478 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 METTL2BQ6P1Q9 378 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TMEM64Q6YI46 380 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 DGAT2L6Q6ZPD8 337 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ISCA2Q86U28 154 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 IFNEQ86WN2 208 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TRIM42Q8IWZ5 723 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GBP7Q8N8V2 638 aaPredicted RBP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ADCY4Q8NFM4 1077 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 RHEBL1Q8TAI7 183 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 DOK4Q8TEW6 326 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 LCORQ96JN0 433 aaPredicted RBP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MED18Q9BUE0 208 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 FAIM2Q9BWQ8 316 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SORBS1Q9BX66 1292 aaKnown RBP11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 BRINP2Q9C0B6 783 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UBQLN3Q9H347 655 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 IPPKQ9H8X2 491 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PLAC1Q9HBJ0 212 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SAYSD1Q9NPB0 183 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SDHAF3Q9NRP4 125 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PACSIN3Q9UKS6 424 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 NFU1Q9UMS0 254 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ASB4Q9Y574 426 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SAR1BQ9Y6B6 198 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TACC2O95359 2948 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
HLA-DQB3-203ENST00000425319 C1orf226A1L170 272 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MSTNO14793 375 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ICOSLGO75144 302 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ABCB1P08183 1280 aaPredicted RBP11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CSNK2A2P19784 350 aaPredicted RBP11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ABCD3P28288 659 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PTPN6P29350 595 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SSTR1P30872 391 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 STX2P32856 288 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 NAGLUP54802 743 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CAV1Q03135 178 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PLCXD2Q0VAA5 305 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GTF2H2Q13888 395 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ACAP2Q15057 778 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 Q5PR19 223 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MRM1Q6IN84 353 aaKnown RBP11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GTF2H2CQ6P1K8 395 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TMEM81Q6P7N7 255 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 POMZP3Q6PJE2 187 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PRR22Q8IZ63 422 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PPM1NQ8N819 430 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 RDH11Q8TC12 318 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TRPC4APQ8TEL6 797 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UBTD2Q8WUN7 234 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CCL19Q99731 98 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 WDR83Q9BRX9 315 aaKnown RBP11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PFDN4Q9NQP4 134 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 GALNT8Q9NY28 637 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ELOVL5Q9NYP7 299 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TAS2R10Q9NYW0 307 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 DKKL1Q9UK85 242 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ADAM29Q9UKF5 820 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 TMCO1Q9UM00 188 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SNX24Q9Y343 169 aa11.18□□□□□ -0.62
HLA-DQB3-203ENST00000425319 A0A0A6YYD5 115 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 A8MXE2 369 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 UBXN8O00124 270 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 ERAL1O75616 437 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 REM1O75628 298 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 SEMA3DO95025 777 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 AIFM1O95831 613 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 LY6G6DO95868 133 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 PEPDP12955 493 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CPMP14384 443 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 EPORP19235 508 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 DRD5P21918 477 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 BSGP35613 385 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 CPOXP36551 454 aa11.17□□□□□ -0.62
HLA-DQB3-203ENST00000425319 MC3RP41968 323 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms