RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 DLGAP1O14490 977 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 SDHDO14521 159 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 EEDO75530 441 aaKnown RBP9.9□□□□□ -0.83
COL4A6-203ENST00000394872 SFTPBP07988 381 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 SLC35E2BP0CK96 405 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 PGGT1BP53609 377 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 ARG2P78540 354 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 BCL2L15Q5TBC7 163 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 LEG1Q6P5S2 330 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM130Q8N3G9 435 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 EXTL2Q9UBQ6 330 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 ACTL7AQ9Y615 435 aa9.9□□□□□ -0.83
COL4A6-203ENST00000394872 CCRL2O00421 344 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CNMDO75829 334 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF888P0CJ79 500 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 AMY2BP19961 511 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 THBS2P35442 1172 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 WDR5P61964 334 aaKnown RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 UGT8Q16880 541 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ATAD3CQ5T2N8 411 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 GRHL2Q6ISB3 625 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 MAMDC2Q7Z304 686 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 SNIP1Q8TAD8 396 aaKnown RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 NEIL3Q8TAT5 605 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CNIH3Q8TBE1 160 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 GATAD2BQ8WXI9 593 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CNN2Q99439 309 aaKnown RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CRB3Q9BUF7 120 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CWH43Q9H720 699 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 AIG1Q9NVV5 245 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ANKMY1Q9P2S6 941 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 TRBV2A0A0J9YWF9 115 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF850A8MQ14 1090 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 PRSS56P0CW18 603 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 UGT2B10P36537 528 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ARSDP51689 593 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 SFT2D3Q587I9 215 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 DNTTIP1Q9H147 329 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF442Q9H7R0 627 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 KCNN3Q9UGI6 736 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ARFGEF2Q9Y6D5 1785 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 LILRB3O75022 631 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 GKN3PP0CG01 181 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 PET100P0DJ07 73 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 IFNGR1P15260 489 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF28P17035 718 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 GSTM2P28161 218 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ACTA2P62736 377 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ACTG2P63267 376 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 RPA4Q13156 261 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 TCEAL1Q15170 157 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM69Q5SWH9 247 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 SCRN2Q96FV2 425 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF317Q96PQ6 595 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 NELL2Q99435 816 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 PEX14O75381 377 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 SCGB2A1O75556 95 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ALDOAP04075 364 aaKnown RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 NDUFV2P19404 249 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 HTR1EP28566 365 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 LCN1P31025 176 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 DCDC5Q6ZRR9 648 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 TMPRSS12Q86WS5 348 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 HS3ST5Q8IZT8 346 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 NPWQ8N729 165 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ACVR1CQ8NER5 493 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 OR5AR1Q8NGP9 310 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 OR5J2Q8NH18 312 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 MOCOSQ96EN8 888 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 FAM46AQ96IP4 442 aaKnown RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ACTRT3Q9BYD9 372 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CDH20Q9HBT6 801 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 GDE1Q9NZC3 331 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 HTRA2O43464 458 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ACVR1BP36896 505 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 CLDN2P57739 230 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 NDUFAF5Q5TEU4 345 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 TCEAL8Q8IYN2 117 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ECHDC3Q96DC8 303 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 ACTR10Q9NZ32 417 aa9.89□□□□□ -0.83
COL4A6-203ENST00000394872 TTLL8A6PVC2 850 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 H7C417 338 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 FAM189A1O60320 539 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CLIC3O95833 236 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF43P17038 809 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 DEFB103AP81534 67 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 AIMP2Q13155 320 aaKnown RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 VASH1Q7L8A9 365 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 LHFPL3Q86UP9 236 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 TM9SF4Q92544 642 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 TOE1Q96GM8 510 aaKnown RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 SLC25A44Q96H78 314 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RDH12Q96NR8 316 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CCDC106Q9BWC9 280 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 MTG2Q9H4K7 406 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ACAD8Q9UKU7 415 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 OXSR1O95747 527 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 MAP2K4P45985 399 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CXCL12P48061 93 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms