RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CDK4P11802 303 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 EPHA2P29317 976 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 TLX1P31314 330 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 LIM2P55344 173 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 UBE2IP63279 158 aaKnown RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 BTN3A2P78410 334 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 GANABQ14697 944 aaKnown RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 SYPL1Q16563 259 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 NDUFA9Q16795 377 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 C18orf63Q68DL7 685 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF770Q6IQ21 691 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 FBXO42Q6P3S6 717 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 CROCCP3Q8IVE0 287 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 CCDC116Q8IYX3 515 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 MAML2Q8IZL2 1156 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 AQP11Q8NBQ7 271 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 NUP43Q8NFH3 380 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 CCL4L1Q8NHW4 92 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 HMGB4Q8WW32 186 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 APH1BQ8WW43 257 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 JPH3Q8WXH2 748 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 SGCDQ92629 289 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 UCN3Q969E3 161 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF681Q96N22 645 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 OR2A5Q96R48 311 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 SIGLEC11Q96RL6 698 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 NIPSNAP1Q9BPW8 284 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 FUNDC2Q9BWH2 189 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 PINK1Q9BXM7 581 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 DGCR6LQ9BY27 220 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 TBC1D17Q9HA65 648 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 NMNAT1Q9HAN9 279 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 LYRM4Q9HD34 91 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 CD93Q9NPY3 652 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 IMPAD1Q9NX62 359 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 NTMQ9P121 344 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 PNMA8BQ9ULN7 279 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 CFAP47Q6ZTR5 3102 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 DSPPQ9NZW4 1301 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A0J9YY10 115 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A1W2PPW3 197 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 PRAMEF27A3QJZ7 478 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 GSAPA4D1B5 854 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 SH3D21A4FU49 640 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 STK25O00506 426 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 PRKRAO75569 313 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 SLITRK5O94991 958 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 BCL10O95999 233 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 STATHP02808 62 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 HMGN2P05204 90 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 IGHV4-34P06331 123 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 MAGP20916 626 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 CD72P21854 359 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 CPN2P22792 545 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ELAVL4P26378 380 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ACVR2AP27037 513 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ST13P50502 369 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 BLKP51451 505 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 CRISP1P54107 249 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 UGT2B15P54855 530 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 GP2P55259 537 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 GPR18Q14330 331 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 GPR19Q15760 415 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ATAD3BQ5T9A4 648 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 UBE2UQ5VVX9 321 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 FCRL6Q6DN72 434 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 LAIR1Q6GTX8 287 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 TCTN3Q6NUS6 607 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 LRRC25Q8N386 305 aaPredicted RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 AVL9Q8NBF6 648 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 KCT2Q8NC54 265 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 OR13H1Q8NG92 308 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 OR9Q2Q8NGE9 314 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 GAB3Q8WWW8 586 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 RERGQ96A58 199 aaPredicted RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 FKBP10Q96AY3 582 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ELP4Q96EB1 424 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 C10orf90Q96M02 699 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ZFYVE21Q9BQ24 234 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 MACROD1Q9BQ69 325 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 DCUN1D5Q9BTE7 237 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 ACTRT3Q9BYD9 372 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 NAA50Q9GZZ1 169 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 PLGRKTQ9HBL7 147 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC2A4RGQ9NR83 387 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 RASSF1Q9NS23 344 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 GPR27Q9NS67 375 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 RLIMQ9NVW2 624 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 FKBP14Q9NWM8 211 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 CPNE7Q9UBL6 633 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 FTSJ1Q9UET6 329 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 PSORS1C1Q9UIG5 152 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 PILRAQ9UKJ1 303 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 KLHL20Q9Y2M5 609 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 SPACA6W5XKT8 324 aa9.85□□□□□ -0.83
POLR2J3-201ENST00000379340 SPTY2D1-AS1A0A0U1RR47 76 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A1W2PRQ8 180 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OR6C74A6NCV1 312 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GLOD5A6NK44 160 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms