RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ANKHQ9HCJ1 492 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 C2orf42Q9NWW7 574 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 NTMQ9P121 344 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 FTSJ1Q9UET6 329 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 APOBEC3BQ9UH17 382 aaKnown RBP13.2□□□□□ -0.3
USF1-202ENST00000368020 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
USF1-202ENST00000368020 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 M0R3G1 203 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 FFAR1O14842 300 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ZSCAN9O15535 394 aaPredicted RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 SEMA4FO95754 770 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 HMGN2P05204 90 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 DCNP07585 359 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 IFI6P09912 130 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 GABRB1P18505 474 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 AK4P27144 223 aaPredicted RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 CD6P30203 668 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ACSL1P33121 698 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SLC19A1P41440 591 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 BTN3A2P78410 334 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 TNFRSF17Q02223 184 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ALDH6A1Q02252 535 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SYPL1Q16563 259 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SMN1Q16637 294 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 DGUOKQ16854 277 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 FRMPD2BQ6IN97 320 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 KLHL17Q6TDP4 642 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 DEF8Q6ZN54 512 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 RD3Q7Z3Z2 195 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 RBM12BQ8IXT5 1001 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 LRRC25Q8N386 305 aaPredicted RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 GTPBP3Q969Y2 492 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 TM4SF19Q96DZ7 209 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 FNDC11Q9BVV2 318 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ACTRT3Q9BYD9 372 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SLC13A4Q9UKG4 626 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SPACA6W5XKT8 324 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 A0A0C4DFX4 3053 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 VCANP13611 3396 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 C10orf142B7Z368 130 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 C4orf51C9J302 202 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 M0R296 226 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 BTN3A3O00478 584 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 PGRMC2O15173 223 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 PPM1DO15297 605 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 B3GALT2O43825 422 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 OR10H3O60404 316 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 LGI1O95970 557 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 VIPP01282 170 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 GASTP01350 101 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 PIPP12273 146 aaPredicted RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 GSTM3P21266 225 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 CHMP24386 653 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 IFNGR2P38484 337 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 STT3AP46977 705 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 MASP1P48740 699 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 EMP3P54852 163 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SNRPGP62308 76 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 BNIP3Q12983 259 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 LASP1Q14847 261 aaKnown RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 CYP27C1Q4G0S4 372 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 PRRT3Q5FWE3 981 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 LAIR1Q6GTX8 287 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 VN1R4Q7Z5H5 301 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ABI3BPQ7Z7G0 1075 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 CCDC116Q8IYX3 515 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 TSACCQ96A04 125 aaPredicted RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 RERGQ96A58 199 aaPredicted RBP13.19□□□□□ -0.3
USF1-202ENST00000368020 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 MS4A4EQ96PG1 132 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 OR2A14Q96R47 310 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 CSF3RQ99062 836 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 RACGAP1Q9H0H5 632 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 TMEM168Q9H0V1 697 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 ANKRD19PQ9H560 264 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 LYRM4Q9HD34 91 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
USF1-202ENST00000368020 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 GLOD5A6NK44 160 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 PDGFBP01127 241 aaPredicted RBP13.18□□□□□ -0.3
USF1-202ENST00000368020 ZNF888P0CJ79 500 aaPredicted RBP13.18□□□□□ -0.3
USF1-202ENST00000368020 UGT2B7P16662 529 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 MAP2K4P45985 399 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 ENTPD1P49961 510 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 MAPK10P53779 464 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 PRKAG1P54619 331 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 RAB8AP61006 207 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms