RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 EXOC3L2Q2M3D2 409 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 BCL7AQ4VC05 210 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SLC25A30Q5SVS4 291 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ARMC4Q5T2S8 1044 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 C9orf64Q5T6V5 341 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 PRAMEF9Q5VWM5 478 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 FRMPD2BQ6IN97 320 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 METAP1DQ6UB28 335 aaPredicted RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 LINGO4Q6UY18 593 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 MBOAT1Q6ZNC8 495 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 USP45Q70EL2 814 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 RDH10Q8IZV5 341 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 NLGN4XQ8N0W4 816 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 CLIP4Q8N3C7 705 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 PROKR2Q8NFJ6 384 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 B3GNT7Q8NFL0 401 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ANGPTL6Q8NI99 470 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ASB15Q8WXK1 588 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 WDR34Q96EX3 536 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SCRN2Q96FV2 425 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ZC3HAV1LQ96H79 300 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 OPALINQ96PE5 141 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 DEPDC7Q96QD5 511 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 MYOCQ99972 504 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 DPH2Q9BQC3 489 aaPredicted RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 MND1Q9BWT6 205 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ASPNQ9BXN1 380 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 GON7Q9BXV9 100 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SLC22A4Q9H015 551 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 REEP4Q9H6H4 257 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ACER3Q9NUN7 267 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 NDUFB11Q9NX14 153 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 MS4A12Q9NXJ0 267 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 PHF11Q9UIL8 331 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 SNX7Q9UNH6 387 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 MGAT4BQ9UQ53 548 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SLC22A14Q9Y267 594 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 FCF1Q9Y324 198 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 ZNF451Q9Y4E5 1061 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SMG1Q96Q15 3661 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 PTPRQQ9UMZ3 2332 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 KALRNO60229 2985 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 HELZ2Q9BYK8 2649 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 A0A1W2PR77 199 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 FADS2P1A8MWK0 482 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 HCN1O60741 890 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 PSIP1O75475 530 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 GPX5O75715 221 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 SLCO2B1O94956 709 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 B3GALT4O96024 378 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 HLA-DQB1P01920 261 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 OSMP13725 252 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 RFX2P48378 723 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 CDH12P55289 794 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 ARPC4P59998 168 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 RAE1P78406 368 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 B4GALNT1Q00973 533 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 ALDH6A1Q02252 535 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 C19orf57Q0VDD7 668 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 PTGES3Q15185 160 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 SHBQ15464 509 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 CST6Q15828 149 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 NDUFA9Q16795 377 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 YIF1BQ5BJH7 314 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 CCNJQ5T5M9 372 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 ATXN7L2Q5T6C5 722 aaPredicted RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 C12orf73Q69YU5 71 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 PEX5LQ8IYB4 626 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 LAS2Q8IYD9 372 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 CACTIN-AS1Q8N1I8 211 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 VWA5B2Q8N398 1253 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 LINC00471Q8N535 108 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 FBXO15Q8NCQ5 510 aaPredicted RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 GPR26Q8NDV2 337 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 WDR36Q8NI36 951 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■■■■■ 33
USF1-201ENST00000368019 UTP15Q8TED0 518 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 KLHL6Q8WZ60 621 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 SLC7A6Q92536 515 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 SH3KBP1Q96B97 665 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 TMEM80Q96HE8 168 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 RNF170Q96K19 258 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 DHRS1Q96LJ7 313 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 FAM129BQ96TA1 746 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 NIPSNAP1Q9BPW8 284 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 EBPLQ9BY08 206 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 CPEB1Q9BZB8 566 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 NDEL1Q9GZM8 345 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 NIPAL2Q9H841 368 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 HHATLQ9HCP6 504 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 MYNNQ9NPC7 610 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 C1GALT1Q9NS00 363 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 NCKAP1Q9Y2A7 1128 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 RPL36Q9Y3U8 105 aaKnown RBP10.9□□□□□ -0.66
USF1-201ENST00000368019 CMAHPQ9Y471 501 aa10.9□□□□□ -0.66
USF1-201ENST00000368019 TDRD6O60522 2096 aaKnown RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 A0A087WV48 116 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms