RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 KBTBD12Q3ZCT8 623 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 C6orf163Q5TEZ5 329 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 GALNT12Q8IXK2 581 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 GCNT2Q8N0V5 402 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 OR14L1PQ8NHC6 308 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 PIK3IP1Q96FE7 263 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 MED18Q9BUE0 208 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 ACTR8Q9H981 624 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 CLCF1Q9UBD9 225 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 RTTNQ86VV8 2226 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
VPS29-201ENST00000360579 KIAA1549Q9HCM3 1950 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 PLPP1O14494 284 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 CRLF1O75462 422 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 PRKRAO75569 313 aaKnown RBP12.58□□□□□ -0.4
VPS29-201ENST00000360579 CBR3O75828 277 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 WISP3O95389 354 aaPredicted RBP12.58□□□□□ -0.4
VPS29-201ENST00000360579 ABCB1P08183 1280 aaPredicted RBP12.58□□□□□ -0.4
VPS29-201ENST00000360579 CD1DP15813 335 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 CRYGSP22914 178 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 PTX3P26022 381 aaPredicted RBP12.58□□□□□ -0.4
VPS29-201ENST00000360579 ABCD3P28288 659 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 SOX18P35713 384 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 ARL4CP56559 192 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 PHEXP78562 749 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 SRYQ05066 204 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 FUT7Q11130 342 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 DDX39BQ13838 428 aaKnown RBP12.58□□□□□ -0.4
VPS29-201ENST00000360579 OR2A2Q6IF42 318 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 OR52E8Q6IFG1 317 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 GRHL2Q6ISB3 625 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 AAGABQ6PD74 315 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 CYP20A1Q6UW02 462 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 IFNEQ86WN2 208 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 GRAMD2AQ8IUY3 354 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 SPATA6LQ8N4H0 392 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 OR7G1Q8NGA0 311 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 HUS1BQ8NHY5 278 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 ADIPOR1Q96A54 375 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 WFIKKN1Q96NZ8 548 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 OSBPL11Q9BXB4 747 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 OR2B2Q9GZK3 357 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 OR10A5Q9H207 317 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 KLHL28Q9NXS3 571 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 MOCS1Q9NZB8 636 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 RNF112Q9ULX5 631 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 CFL2Q9Y281 166 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 TSC22D4Q9Y3Q8 395 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 ASB4Q9Y574 426 aa12.58□□□□□ -0.4
VPS29-201ENST00000360579 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 A0A1W2PNV4 684 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 GLOD5A6NK44 160 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 K7EPI3 171 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 SIAH2O43255 324 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 TMCC2O75069 709 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PPM1BO75688 479 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 TNFSF13O75888 250 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 FREM3P0C091 2139 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 FAM58BPP0C7Q3 252 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PIK3R1P27986 724 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 CD79BP40259 229 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PTH2RP49190 550 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 FAM27E3Q08E93 113 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 OR4D1Q15615 310 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 MRM1Q6IN84 353 aaKnown RBP12.57□□□□□ -0.4
VPS29-201ENST00000360579 NUP54Q7Z3B4 507 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 TRIM42Q8IWZ5 723 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PRR22Q8IZ63 422 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PPP1R14CQ8TAE6 165 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 REPS1Q96D71 796 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 FAM111AQ96PZ2 611 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 SLC39A3Q9BRY0 314 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 DDX31Q9H8H2 851 aaKnown RBP12.57□□□□□ -0.4
VPS29-201ENST00000360579 ELOVL5Q9NYP7 299 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 OPTCQ9UBM4 332 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 EXO1Q9UQ84 846 aaKnown RBP12.57□□□□□ -0.4
VPS29-201ENST00000360579 DLGAP4Q9Y2H0 992 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 PCDHGA11Q9Y5H2 935 aa12.57□□□□□ -0.4
VPS29-201ENST00000360579 A0A0A6YYD5 115 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 A0A1W2PR48 441 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 PLOD2O00469 737 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 ACOX3O15254 700 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 ICOSLGO75144 302 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 SMNDC1O75940 238 aaKnown RBP eCLIP12.56□□□□□ -0.46e-11■■■■□ 20.7
VPS29-201ENST00000360579 AIFM1O95831 613 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 PAX1P15863 534 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 EPB42P16452 691 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 STMN1P16949 149 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 GFRA1P56159 465 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 CUL3Q13618 768 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 P4HA3Q7Z4N8 544 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 NUDT13Q86X67 352 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 ANKMY2Q8IV38 441 aa12.56□□□□□ -0.4
VPS29-201ENST00000360579 STAG3L4Q8TBR4 150 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms