RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 L3MBTL1Q9Y468 752 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 FADS3Q9Y5Q0 445 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 KAT6AQ92794 2004 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 MACROD2A1Z1Q3 448 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 RFPL4AA6NLU0 287 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 RFPL4AL1F8VTS6 287 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRKCGP05129 697 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 EGR2P11161 476 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 AOC1P19801 751 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CHATP28329 748 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 RAP1GDS1P52306 607 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 THOP1P52888 689 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 P2RX3P56373 397 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NME5P56597 212 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NCALDP61601 193 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NUCB2P80303 420 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HNRNPUQ00839 825 aaKnown RBP eCLIP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TCP10Q12799 353 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NR1I3Q14994 352 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MICBQ29980 383 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GXYLT1Q4G148 440 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 C6orf226Q5I0X4 101 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TMEM211Q6ICI0 200 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 FRMPD2BQ6IN97 320 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TAPT1Q6NXT6 567 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TMEM71Q6P5X7 295 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ALLCQ8N6M5 410 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 SCAIQ8N9R8 606 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NEK11Q8NG66 645 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR56A4Q8NGH8 313 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 EXD1Q8NHP7 514 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ACMSDQ8TDX5 336 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 SERAC1Q96JX3 654 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HBEGFQ99075 208 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HAUS8Q9BT25 410 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CHID1Q9BWS9 393 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ACTL8Q9H568 366 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF696Q9H7X3 374 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MINDY3Q9H8M7 445 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GCNT4Q9P109 453 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 STK39Q9UEW8 545 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 UBQLN2Q9UHD9 624 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PCDH15Q96QU1 1955 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ATG2BQ96BY7 2078 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TRIP11Q15643 1979 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR6C68A6NDL8 312 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 LRRTM2O43300 516 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSPAN12O95859 305 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HBQ1P09105 142 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSPY3P0CV98 308 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TSPY8P0CW00 308 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRPS2P11908 318 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 XRCC1P18887 633 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MATN1P21941 496 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TCEA1P23193 301 aaKnown RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HRH2P25021 359 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ALDH4A1P30038 563 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRDX6P30041 224 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PPARGP37231 505 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ARSFP54793 590 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 DHODHQ02127 395 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MGAT3Q09327 533 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GRIK2Q13002 908 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 KCNA10Q16322 511 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PTGISQ16647 500 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TIMM23BQ5SRD1 257 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 WDR25Q64LD2 544 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 WDR88Q6ZMY6 472 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ABHD12BQ7Z5M8 362 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GCSAMQ8N6F7 178 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR7G2Q8NG99 324 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 LKAAEAR1Q8TD35 194 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 OIT3Q8WWZ8 545 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GLYATL1Q969I3 302 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ATP6V1E2Q96A05 226 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 RPEQ96AT9 228 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 KIRREL1Q96J84 757 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCDC114Q96M63 670 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC40A1Q9NP59 571 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PALMDQ9NP74 551 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CYB5R1Q9UHQ9 305 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CLUHO75153 1309 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRAMEF33A0A0G2JMD5 474 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 C9orf118A6NHY6 69 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 DBX1A6NMT0 343 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 H3BS24 57 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCL24O00175 119 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 OR1F1O43749 312 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CIDEAO60543 219 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRAMEF10O60809 474 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GPC4O75487 556 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GCM2O75603 506 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GSTT2P0CG29 244 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GSTT2BP0CG30 244 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CT45A8P0DMV1 189 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CT45A9P0DMV2 189 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 JUNBP17275 347 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MMP11P24347 488 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRKCHP24723 683 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 IVDP26440 423 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms