RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 CHIC1Q5VXU3 224 aa6.22□□□□□ -1.41
SMARCAD1-202ENST00000359052 AEBP2Q6ZN18 517 aaPredicted RBP6.16□□□□□ -1.42
SMARCAD1-202ENST00000359052 PHF23Q9BUL5 403 aaPredicted RBP5.87□□□□□ -1.47
SMARCAD1-202ENST00000359052 CSRNP3Q8WYN3 585 aa5.25□□□□□ -1.57
SMARCAD1-202ENST00000359052 DNAJC5BQ9UF47 199 aa5.24□□□□□ -1.57
SMARCAD1-202ENST00000359052 SLC24A1O60721 1099 aa5.2□□□□□ -1.58
SMARCAD1-202ENST00000359052 PLPPR3Q6T4P5 718 aa5.16□□□□□ -1.58
SMARCAD1-202ENST00000359052 ZBTB22O15209 634 aa5.13□□□□□ -1.59
SMARCAD1-202ENST00000359052 KCNA4P22459 653 aa5.11□□□□□ -1.59
SMARCAD1-202ENST00000359052 POTEDQ86YR6 584 aa4.98□□□□□ -1.61
SMARCAD1-202ENST00000359052 RTN4Q9NQC3 1192 aaKnown RBP4.97□□□□□ -1.61
SMARCAD1-202ENST00000359052 ADRA2BP18089 450 aa4.93□□□□□ -1.62
SMARCAD1-202ENST00000359052 PPP6R1Q9UPN7 881 aa4.84□□□□□ -1.63
SMARCAD1-202ENST00000359052 NCBP3Q53F19 620 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-202ENST00000359052 SENP3Q9H4L4 574 aaPredicted RBP4.8□□□□□ -1.64
SMARCAD1-202ENST00000359052 DNAJC5Q9H3Z4 198 aa4.79□□□□□ -1.64
SMARCAD1-202ENST00000359052 FOXD1Q16676 465 aa4.76□□□□□ -1.65
SMARCAD1-202ENST00000359052 EHMT2Q96KQ7 1210 aa4.75□□□□□ -1.65
SMARCAD1-202ENST00000359052 AMER1Q5JTC6 1135 aaPredicted RBP4.72□□□□□ -1.65
SMARCAD1-202ENST00000359052 PROM2Q8N271 834 aa4.7□□□□□ -1.66
SMARCAD1-202ENST00000359052 NPM3O75607 178 aaKnown RBP4.66□□□□□ -1.66
SMARCAD1-202ENST00000359052 SLC4A1APQ9BWU0 796 aaKnown RBP4.55□□□□□ -1.68
SMARCAD1-202ENST00000359052 DAXXQ9UER7 740 aaPredicted RBP4.53□□□□□ -1.68
SMARCAD1-202ENST00000359052 KDM2AQ9Y2K7 1162 aa4.53□□□□□ -1.68
SMARCAD1-202ENST00000359052 TIMELESSQ9UNS1 1208 aa4.53□□□□□ -1.68
SMARCAD1-202ENST00000359052 SLC4A2P04920 1241 aa4.51□□□□□ -1.69
SMARCAD1-202ENST00000359052 PRKCSHP14314 528 aaPredicted RBP4.5□□□□□ -1.69
SMARCAD1-202ENST00000359052 PLCB2Q00722 1185 aa4.48□□□□□ -1.69
SMARCAD1-202ENST00000359052 TAOK2Q9UL54 1235 aa4.47□□□□□ -1.69
SMARCAD1-202ENST00000359052 PPP4R3CPQ6ZMV5 832 aa4.46□□□□□ -1.7
SMARCAD1-202ENST00000359052 PKD2Q13563 968 aa4.4□□□□□ -1.7
SMARCAD1-202ENST00000359052 ARXQ96QS3 562 aa4.39□□□□□ -1.71
SMARCAD1-202ENST00000359052 ATXN8OSP0DMR3 200 aa4.37□□□□□ -1.71
SMARCAD1-202ENST00000359052 NPM1P06748 294 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMARCAD1-202ENST00000359052 FOXD4L1Q9NU39 408 aa4.35□□□□□ -1.71
SMARCAD1-202ENST00000359052 ATF5Q9Y2D1 282 aaPredicted RBP4.34□□□□□ -1.71
SMARCAD1-202ENST00000359052 MSH5O43196 834 aa4.32□□□□□ -1.72
SMARCAD1-202ENST00000359052 FBLN2P98095 1184 aa4.29□□□□□ -1.72
SMARCAD1-202ENST00000359052 VSIG10Q8N0Z9 540 aa4.29□□□□□ -1.72
SMARCAD1-202ENST00000359052 HRCP23327 699 aa4.28□□□□□ -1.72
SMARCAD1-202ENST00000359052 HOXD11P31277 338 aaPredicted RBP4.28□□□□□ -1.72
SMARCAD1-202ENST00000359052 APLP2Q06481 763 aa4.26□□□□□ -1.73
SMARCAD1-202ENST00000359052 CNKSR2Q8WXI2 1034 aa4.25□□□□□ -1.73
SMARCAD1-202ENST00000359052 IFNLR1Q8IU57 520 aaPredicted RBP4.24□□□□□ -1.73
SMARCAD1-202ENST00000359052 CCDC180Q9P1Z9 1646 aa4.24□□□□□ -1.73
SMARCAD1-202ENST00000359052 NISCHQ9Y2I1 1504 aa4.23□□□□□ -1.73
SMARCAD1-202ENST00000359052 TMEM132AQ24JP5 1023 aa4.23□□□□□ -1.73
SMARCAD1-202ENST00000359052 RNF216Q9NWF9 866 aaPredicted RBP4.21□□□□□ -1.74
SMARCAD1-202ENST00000359052 MKRN4PQ13434 485 aaPredicted RBP4.21□□□□□ -1.74
SMARCAD1-202ENST00000359052 TRHP20396 242 aaPredicted RBP4.19□□□□□ -1.74
SMARCAD1-202ENST00000359052 MAPK8IP2Q13387 824 aaPredicted RBP4.17□□□□□ -1.74
SMARCAD1-202ENST00000359052 BCANQ96GW7 911 aa4.16□□□□□ -1.74
SMARCAD1-202ENST00000359052 C1orf115Q9H7X2 142 aa4.12□□□□□ -1.75
SMARCAD1-202ENST00000359052 UNC13AQ9UPW8 1703 aa4.11□□□□□ -1.75
SMARCAD1-202ENST00000359052 GTF3C3Q9Y5Q9 886 aa4.11□□□□□ -1.75
SMARCAD1-202ENST00000359052 FKBP8Q14318 412 aa4.11□□□□□ -1.75
SMARCAD1-202ENST00000359052 NKX1-1Q15270 411 aaPredicted RBP4.1□□□□□ -1.75
SMARCAD1-202ENST00000359052 ONECUT3O60422 494 aaPredicted RBP4.1□□□□□ -1.75
SMARCAD1-202ENST00000359052 KLHL34Q8N239 644 aa4.09□□□□□ -1.76
SMARCAD1-202ENST00000359052 IGSF5Q9NSI5 407 aa4.08□□□□□ -1.76
SMARCAD1-202ENST00000359052 TULP1O00294 542 aaPredicted RBP4.08□□□□□ -1.76
SMARCAD1-202ENST00000359052 TPRNQ4KMQ1 711 aa4.08□□□□□ -1.76
SMARCAD1-202ENST00000359052 BBXQ8WY36 941 aaPredicted RBP4.07□□□□□ -1.76
SMARCAD1-202ENST00000359052 DMRT2Q9Y5R5 561 aa4.05□□□□□ -1.76
SMARCAD1-202ENST00000359052 RNF25Q96BH1 459 aaPredicted RBP4.04□□□□□ -1.76
SMARCAD1-202ENST00000359052 LOC105371045A0A1W2PR82 267 aa4.03□□□□□ -1.76
SMARCAD1-202ENST00000359052 BRPF1P55201 1214 aaPredicted RBP4.02□□□□□ -1.77
SMARCAD1-202ENST00000359052 MYO15BQ96JP2 1530 aa4.01□□□□□ -1.77
SMARCAD1-202ENST00000359052 MYCNP04198 464 aaPredicted RBP4□□□□□ -1.77
SMARCAD1-202ENST00000359052 RNF39Q9H2S5 420 aa4□□□□□ -1.77
SMARCAD1-202ENST00000359052 TRIM26Q12899 539 aaPredicted RBP3.99□□□□□ -1.77
SMARCAD1-202ENST00000359052 TSHZ2Q9NRE2 1034 aa3.99□□□□□ -1.77
SMARCAD1-202ENST00000359052 NECTIN2Q92692 538 aa3.98□□□□□ -1.77
SMARCAD1-202ENST00000359052 GTPBP6O43824 516 aaPredicted RBP3.97□□□□□ -1.77
SMARCAD1-202ENST00000359052 RGL2O15211 777 aa3.96□□□□□ -1.78
SMARCAD1-202ENST00000359052 UBTFP17480 764 aaKnown RBP3.96□□□□□ -1.78
SMARCAD1-202ENST00000359052 RGS22Q8NE09 1264 aa3.96□□□□□ -1.78
SMARCAD1-202ENST00000359052 VASPP50552 380 aaPredicted RBP3.95□□□□□ -1.78
SMARCAD1-202ENST00000359052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.95□□□□□ -1.78
SMARCAD1-202ENST00000359052 HOMEZQ8IX15 550 aa3.94□□□□□ -1.78
SMARCAD1-202ENST00000359052 ARIH1Q9Y4X5 557 aaPredicted RBP3.94□□□□□ -1.78
SMARCAD1-202ENST00000359052 DCAF1Q9Y4B6 1507 aa3.93□□□□□ -1.78
SMARCAD1-202ENST00000359052 SGIP1Q9BQI5 828 aa3.93□□□□□ -1.78
SMARCAD1-202ENST00000359052 GPR37O15354 613 aa3.92□□□□□ -1.78
SMARCAD1-202ENST00000359052 HS6ST3Q8IZP7 471 aa3.92□□□□□ -1.78
SMARCAD1-202ENST00000359052 MNX1P50219 401 aaPredicted RBP3.91□□□□□ -1.78
SMARCAD1-202ENST00000359052 FNBP4Q8N3X1 1017 aaPredicted RBP3.9□□□□□ -1.79
SMARCAD1-202ENST00000359052 ZMYND10O75800 440 aa3.89□□□□□ -1.79
SMARCAD1-202ENST00000359052 U3KPZ7 1027 aaPredicted RBP3.89□□□□□ -1.79
SMARCAD1-202ENST00000359052 CADPS2Q86UW7 1296 aa3.86□□□□□ -1.79
SMARCAD1-202ENST00000359052 IGSF3O75054 1194 aa3.85□□□□□ -1.79
SMARCAD1-202ENST00000359052 BICRAQ9NZM4 1560 aa3.84□□□□□ -1.79
SMARCAD1-202ENST00000359052 ILDR1Q86SU0 546 aaPredicted RBP3.84□□□□□ -1.8
SMARCAD1-202ENST00000359052 HAP1P54257 671 aaPredicted RBP3.83□□□□□ -1.8
SMARCAD1-202ENST00000359052 SRPK2P78362 688 aaKnown RBP3.83□□□□□ -1.8
SMARCAD1-202ENST00000359052 PIAS4Q8N2W9 510 aaPredicted RBP3.83□□□□□ -1.8
SMARCAD1-202ENST00000359052 OXER1Q8TDS5 423 aa3.82□□□□□ -1.8
SMARCAD1-202ENST00000359052 NOM1Q5C9Z4 860 aaKnown RBP3.8□□□□□ -1.8
SMARCAD1-202ENST00000359052 PLEKHG3A1L390 1219 aa3.8□□□□□ -1.8
SMARCAD1-202ENST00000359052 TESPA1A2RU30 521 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms