RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 DSG2Q14126 1118 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 ADAMTSL4Q6UY14 1074 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 PRR22Q8IZ63 422 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SGTBQ96EQ0 304 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 TIMMDC1Q9NPL8 285 aa14.14□□□□□ -0.15
COL17A1-201ENST00000353479 SLC35F4A4IF30 521 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 HSD17B1P14061 328 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 PRDX1Q06830 199 aaKnown RBP14.13□□□□□ -0.15
COL17A1-201ENST00000353479 NAXEQ8NCW5 288 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 CNIH3Q8TBE1 160 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 NAT6Q93015 286 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 LRRC42Q9Y546 428 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 PCDHGA7Q9Y5G6 932 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 SOCS2O14508 198 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 LINC01565O15544 149 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 SEC14L5O43304 696 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 AP3S2P59780 193 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 PIGGQ5H8A4 983 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 HS6ST2Q96MM7 605 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF559Q9BR84 538 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 SAGE2PA6NJ88 616 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF879B4DU55 563 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 RNASET2O00584 256 aaKnown RBP14.13□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF208O43345 1280 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 GABBR2O75899 941 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 APOL3O95236 402 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 ZDHHC11BP0C7U3 371 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 MAGEA3P43357 314 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 GCGRP47871 477 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 RPL34P49207 117 aaKnown RBP14.13□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF440Q8IYI8 595 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 VWA5B2Q8N398 1253 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 JAGN1Q8N5M9 183 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 TTYH2Q9BSA4 534 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 BTNL2Q9UIR0 455 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 PTRH2Q9Y3E5 179 aaKnown RBP14.13□□□□□ -0.15
COL17A1-201ENST00000353479 COL4A1P02462 1669 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 GABRR3A8MPY1 467 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 RASAL1O95294 804 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 RAB25P57735 213 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 DCDC1P59894 354 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 HSF5Q4G112 596 aaPredicted RBP14.13□□□□□ -0.15
COL17A1-201ENST00000353479 TMEM52BQ4KMG9 183 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 OR2L8Q8NGY9 312 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 EDAQ92838 391 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 TANKQ92844 425 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 SRPK3Q9UPE1 567 aa14.13□□□□□ -0.15
COL17A1-201ENST00000353479 VSTM2BA6NLU5 285 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 PRRT4C9JH25 899 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 PROM1O43490 865 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 GPX3P22352 226 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ALG10BQ5I7T1 473 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 CDRT4Q8N9R6 151 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 MAGIXQ9H6Y5 334 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 MYNNQ9NPC7 610 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 A8MVJ9 347 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 CLDN25C9JDP6 229 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 SLC22A1O15245 554 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 TPMTP51580 245 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 AFF3P51826 1226 aaKnown RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 INHBCP55103 352 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF101Q8IZC7 436 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 OR5D16Q8NGK9 328 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 UBXN10Q96LJ8 280 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 SLC6A18Q96N87 628 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 GPN1Q9HCN4 374 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 HPF1Q9NWY4 346 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ING4Q9UNL4 249 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ANTXRLA6NF34 631 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 CBX5P45973 191 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 SGCAQ16586 387 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ZBED5Q49AG3 693 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 MEDAGQ5VYS4 303 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 FAM174AQ8TBP5 190 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 RDH12Q96NR8 316 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 E2F3O00716 465 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 EIF2DP41214 584 aaKnown RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 RPS3AP61247 264 aaKnown RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 OLFML2AQ68BL7 652 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 VRK3Q8IV63 474 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 GID4Q8IVV7 300 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ENDOVQ8N8Q3 282 aaKnown RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 MFSD2AQ8NA29 543 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 NSMAFQ92636 917 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 SLC6A16Q9GZN6 736 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 NANSQ9NR45 359 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 TM7SF3Q9NS93 570 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 ERVK-19Q9WJR5 959 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 BRINP1O60477 761 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 NOS1APO75052 506 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 MT-ND5P03915 603 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 HIST1H1TP22492 207 aaPredicted RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 IMPA1P29218 277 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 LCN8Q6JVE9 175 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 FBXO27Q8NI29 283 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 HOXD1Q9GZZ0 328 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 DCSTAMPQ9H295 470 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 SRA1Q9HD15 236 aaKnown RBP14.12□□□□□ -0.15
COL17A1-201ENST00000353479 TIGARQ9NQ88 270 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms