RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CHRDQ9H2X0 955 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF556Q9HAH1 456 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 BRF2Q9HAW0 419 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 PRM3Q9NNZ6 103 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 C1GALT1Q9NS00 363 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 RHCGQ9UBD6 479 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CACNA1EQ15878 2313 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 SCN2AQ99250 2005 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 TMEM131Q92545 1883 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 IGKV1-8A0A0C4DH67 115 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 A0A1W2PPC4 97 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 A6NCN8 305 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 A8MVJ9 347 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 FAM227AF5H4B4 570 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CYP7B1O75881 506 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RASGRP1O95267 797 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 C6orf47O95873 294 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 KRT8P05787 483 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HSD3B1P14060 373 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HOXB3P14651 431 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CBLP22681 906 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CHMP24386 653 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PTX3P26022 381 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HSD3B2P26439 372 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PEBP1P30086 187 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 TIA1P31483 386 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RPS19P39019 145 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HNF4AP41235 474 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 XCR1P46094 333 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HMGA2P52926 109 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CDC42P60953 191 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 MC1RQ01726 317 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PCDH1Q08174 1060 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 LRRC32Q14392 662 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 MPEG1Q2M385 716 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 TIMM50Q3ZCQ8 353 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ZMAT1Q5H9K5 638 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 TOR1AIP1Q5JTV8 583 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ATAD3CQ5T2N8 411 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PLAG1Q6DJT9 500 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 KLHL17Q6TDP4 642 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 GATAD2AQ86YP4 633 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 DCUN1D3Q8IWE4 304 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 UBQLNLQ8IYU4 475 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 AQP11Q8NBQ7 271 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 OR5AK3PQ8NH89 298 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 WDR36Q8NI36 951 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 VANGL1Q8TAA9 524 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 C9orf43Q8TAL5 461 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PIK3R3Q92569 461 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CIDECQ96AQ7 238 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RAD51AP1Q96B01 352 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 METTL2AQ96IZ6 378 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CEP19Q96LK0 163 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 OPALINQ96PE5 141 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 TRNT1Q96Q11 434 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CCDC32Q9BV29 185 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 BARHL1Q9BZE3 327 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RMI1Q9H9A7 625 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 GPR27Q9NS67 375 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 FTSJ1Q9UET6 329 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF221Q9UK13 617 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ACSL5Q9ULC5 683 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ICKQ9UPZ9 632 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 WBP11Q9Y2W2 641 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 HS3ST3A1Q9Y663 406 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 EFCAB10A6NFE3 127 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ZAR1LA6NP61 321 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PRAMEF26H0Y7S4 382 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RGS5O15539 181 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 KLHL18O94889 574 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CCNB2O95067 398 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 APBB3O95704 486 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 ITGA2P17301 1181 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CNR2P34972 360 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 SOX3P41225 446 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PRIM2P49643 509 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CCR5P51681 352 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RPS13P62277 151 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 EEF1A2Q05639 463 aaKnown RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 C1orf61Q13536 156 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 GPR50Q13585 617 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 SLC5A12Q1EHB4 618 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 SPIN4Q56A73 249 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 GCNT6Q5T4J0 391 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 FRMPD2BQ6IN97 320 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PTCHD4Q6ZW05 846 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 RNF130Q86XS8 419 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 OR8H2Q8N162 312 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 OR52N2Q8NGI0 321 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 OR52E1Q8NGJ3 308 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 GOT1L1Q8NHS2 421 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM55-204ENST00000353317 IL4I1Q96RQ9 567 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 PIP5K1AQ99755 562 aa8.12□□□□□ -1.11
TRIM55-204ENST00000353317 CNPPD1Q9BV87 410 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms