RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 ORAI3Q9BRQ5 295 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 TMEM246Q9BRR3 403 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 NIPAL2Q9H841 368 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 C17orf113A0A1B0GUU1 675 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 C5orf51A6NDU8 294 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 PRAMEF2O60811 474 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 CDK4P11802 303 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 CSF2RAP15509 400 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 PRLHRP49683 370 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 ARSDP51689 593 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 RPS3AP61247 264 aaKnown RBP6.88□□□□□ -1.31
SOX6-201ENST00000316399 ACVR1Q04771 509 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 RAB11BQ15907 218 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 NTRK2Q16620 822 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 PUS10Q3MIT2 529 aaKnown RBP6.88□□□□□ -1.31
SOX6-201ENST00000316399 ZNF534Q76KX8 674 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 PELI3Q8N2H9 469 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 PIAS4Q8N2W9 510 aaPredicted RBP6.88□□□□□ -1.31
SOX6-201ENST00000316399 OR51G2Q8NGK0 314 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 TMEM19Q96HH6 336 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 SERINC2Q96SA4 455 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 PRRT1Q99946 306 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 LMF2Q9BU23 707 aaKnown RBP6.88□□□□□ -1.31
SOX6-201ENST00000316399 RAB9BQ9NP90 201 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 SAGE1Q9NXZ1 904 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 B4GALT7Q9UBV7 327 aa6.88□□□□□ -1.31
SOX6-201ENST00000316399 MRPL42Q9Y6G3 142 aaKnown RBP6.88□□□□□ -1.31
SOX6-201ENST00000316399 CPSF4LA6NMK7 179 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 RDH16O75452 317 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 FARS2O95363 451 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 LAMP1P11279 417 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CD53P19397 219 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ZNF81P51508 661 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 OR12D2P58182 307 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PSMA6P60900 246 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 APOFQ13790 326 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 GNMTQ14749 295 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CHRDL2Q6WN34 429 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 HTR3DQ70Z44 454 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 MMAAQ8IVH4 418 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 SLC22A15Q8IZD6 547 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ECHDC3Q96DC8 303 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CACNG6Q9BXT2 260 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SEMA4CQ9C0C4 833 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 KCNN3Q9UGI6 736 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 GMEB2Q9UKD1 530 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 A0A1B0GUL6 1792 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 OR2T1O43869 369 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CYP17A1P05093 508 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 DUSP3P51452 185 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 NKX3-2P78367 333 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 MLLT1Q03111 559 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 RAB12Q6IQ22 244 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 Q6ZVL8 140 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SPERTQ8NA61 448 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SIMC1Q8NDZ2 872 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 MAPK15Q8TD08 544 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ZNF578Q96N58 590 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 B3GNT4Q9C0J1 378 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ABCG4Q9H172 646 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 NAALAD2Q9Y3Q0 740 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 DOCK2Q92608 1830 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SC5DO75845 299 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ZNF865P0CJ78 1059 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 SERTAD2Q14140 314 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 GBX1Q14549 363 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 CLVS2Q5SYC1 327 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 FAM180AQ6UWF9 173 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PARGQ86W56 976 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 DNAJC22Q8N4W6 341 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 C16orf78Q8WTQ4 265 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SYT17Q9BSW7 474 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SYPP08247 313 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 LHCGRP22888 699 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SNRPGP62308 76 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 AMZ1Q400G9 498 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SYT6Q5T7P8 510 aaPredicted RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 HENMT1Q5T8I9 393 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 SLC18B1Q6NT16 456 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 RPL22L1Q6P5R6 122 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 Q6ZNX1 250 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PIWIL3Q7Z3Z3 882 aaKnown RBP6.87□□□□□ -1.31
SOX6-201ENST00000316399 OR52B6Q8NGF0 335 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 TMEM163Q8TC26 289 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 PROKR1Q8TCW9 393 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 ASB11Q8WXH4 323 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 SYT4Q9H2B2 425 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 NELFAQ9H3P2 528 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 XKR8Q9H6D3 395 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 GPR83Q9NYM4 423 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 NPFFR2Q9Y5X5 522 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 RAD51DO75771 328 aa6.87□□□□□ -1.31
SOX6-201ENST00000316399 GABARAPO95166 117 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms