RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SF3B4Q15427 424 aaKnown RBP eCLIP11.71□□□□□ -0.533e-8■■■□□ 15.6
RNF4-201ENST00000314289 NPTX1Q15818 432 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 BCL2A1Q16548 175 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 ARMC8Q8IUR7 673 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 ENTHD1Q8IYW4 607 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 TAGAPQ8N103 731 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 TTLQ8NG68 377 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 RPL3LQ92901 407 aaKnown RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 NECTIN4Q96NY8 510 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 OR2A14Q96R47 310 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 PIP5K1AQ99755 562 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 SNX7Q9UNH6 387 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 PCDHGA6Q9Y5G7 932 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 PMF1-BGLAPU3KQ54 211 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 FRS3O43559 492 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 HCRTR1O43613 425 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 FAM20BO75063 409 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 MFN2O95140 757 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 SOX14O95416 240 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 CTSBP07858 339 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 PTNP21246 168 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 MAOBP27338 520 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 RYKP34925 604 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 GABARAPL2P60520 117 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 ABATP80404 500 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 ILF3Q12906 894 aaKnown RBP eCLIP11.71□□□□□ -0.54
RNF4-201ENST00000314289 SELENBP1Q13228 472 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 SRSF5Q13243 272 aaKnown RBP11.71□□□□□ -0.54
RNF4-201ENST00000314289 PIN1Q13526 163 aaPredicted RBP11.71□□□□□ -0.54
RNF4-201ENST00000314289 MAD2L1BPQ15013 274 aaPredicted RBP11.71□□□□□ -0.54
RNF4-201ENST00000314289 MICAQ29983 383 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 TMEM35AQ53FP2 167 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 ZC3H12BQ5HYM0 836 aaKnown RBP11.71□□□□□ -0.54
RNF4-201ENST00000314289 KLHL17Q6TDP4 642 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 PAQR7Q86WK9 346 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 MFSD9Q8NBP5 474 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 AQP11Q8NBQ7 271 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 TBC1D20Q96BZ9 403 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 APOL4Q9BPW4 351 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 PSD2Q9BQI7 771 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 MIR1-1HGQ9H1L0 117 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 CA14Q9ULX7 337 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 HEBP2Q9Y5Z4 205 aa11.71□□□□□ -0.54
RNF4-201ENST00000314289 WBP4O75554 376 aaKnown RBP11.7□□□□□ -0.54
RNF4-201ENST00000314289 GABARAPO95166 117 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 NTN1O95631 604 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 GASTP01350 101 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 IFNA14P01570 189 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 FRKP42685 505 aaPredicted RBP11.7□□□□□ -0.54
RNF4-201ENST00000314289 SERPINB10P48595 397 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 DEFB110Q30KQ9 67 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 CCDC80Q76M96 950 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 NANOGNBQ7Z5D8 188 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 TAF8Q7Z7C8 310 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 P2RY8Q86VZ1 359 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 TRIM69Q86WT6 500 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 PROX1Q92786 737 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 FBRSQ9HAH7 460 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 ADAM29Q9UKF5 820 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 RNF6Q9Y252 685 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 ENPP4Q9Y6X5 453 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 A6NCN8 305 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 TCEA1P23193 301 aaKnown RBP11.7□□□□□ -0.54
RNF4-201ENST00000314289 AHRP35869 848 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 SEC23BQ15437 767 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 GPAT3Q53EU6 434 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 ASPGQ86U10 573 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 C11orf74Q86VG3 221 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 SETD9Q8NE22 299 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 FLVCR1-AS1Q8TAF5 88 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 DNASE1L2Q92874 299 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 POP5Q969H6 163 aaKnown RBP11.7□□□□□ -0.54
RNF4-201ENST00000314289 PITHD1Q9GZP4 211 aaPredicted RBP11.7□□□□□ -0.54
RNF4-201ENST00000314289 C8orf33Q9H7E9 229 aaPredicted RBP11.7□□□□□ -0.54
RNF4-201ENST00000314289 ENTPD4Q9Y227 616 aa11.7□□□□□ -0.54
RNF4-201ENST00000314289 SLC22A1O15245 554 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 PROM1O43490 865 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 KCNJ13O60928 360 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 APBB3O95704 486 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 DLGAP3O95886 979 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 MT-ND2P03891 347 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 CHRM4P08173 479 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 DRD2P14416 443 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 C21orf33P30042 268 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 CD6P30203 668 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 BUD31P41223 144 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 PPM1FP49593 454 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 HOXC5Q00444 222 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 TCTN3Q6NUS6 607 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 TSPYL5Q86VY4 417 aaPredicted RBP11.69□□□□□ -0.54
RNF4-201ENST00000314289 CCDC103Q8IW40 242 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
RNF4-201ENST00000314289 TBC1D19Q8N5T2 526 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms