RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 AMDHD1Q96NU7 426 aa15.82■□□□□ 0.12
PUF60-201ENST00000313352 NXF5Q9H1B4 397 aaKnown RBP15.82■□□□□ 0.12
PUF60-201ENST00000313352 REEP4Q9H6H4 257 aa15.82■□□□□ 0.12
PUF60-201ENST00000313352 WDR55Q9H6Y2 383 aaPredicted RBP15.82■□□□□ 0.12
PUF60-201ENST00000313352 SLCO1B3Q9NPD5 702 aa15.82■□□□□ 0.12
PUF60-201ENST00000313352 HPF1Q9NWY4 346 aa15.82■□□□□ 0.12
PUF60-201ENST00000313352 SH3BP4Q9P0V3 963 aa15.82■□□□□ 0.12
PUF60-201ENST00000313352 ERVK-11Q9UQG0 969 aa15.82■□□□□ 0.12
PUF60-201ENST00000313352 GOLGA8QA0A0J9YX86 632 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 GOLGA8OA6NCC3 632 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 GOLGA8NF8WBI6 632 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 NME2P1O60361 137 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 CCL3P10147 92 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 CD46P15529 392 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 NME2P22392 152 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 MC3RP41968 323 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 PDE7AQ13946 482 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 ZNF324BQ6AW86 544 aaPredicted RBP15.81■□□□□ 0.12
PUF60-201ENST00000313352 ZNF675Q8TD23 568 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 C5orf34Q96MH7 638 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 FRMD6Q96NE9 622 aa15.81■□□□□ 0.12
PUF60-201ENST00000313352 HELZ2Q9BYK8 2649 aaKnown RBP15.81■□□□□ 0.12
PUF60-201ENST00000313352 HMGB1P1B2RPK0 211 aaPredicted RBP15.8■□□□□ 0.12
PUF60-201ENST00000313352 SDHDO14521 159 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 HSPB3Q12988 150 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 ZNF791Q3KP31 576 aaPredicted RBP15.8■□□□□ 0.12
PUF60-201ENST00000313352 GOLGA6L1Q8N7Z2 621 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 PSD4Q8NDX1 1056 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 OR7G1Q8NGA0 311 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 MEAF6Q9HAF1 191 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 GIMAP4Q9NUV9 329 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 OR6C76A6NM76 312 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 CBX6O95503 412 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 LAMP1P11279 417 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 EPHA3P29320 983 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 MPIP34949 423 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 TDGF1P3P51864 188 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 CORO7P57737 925 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 PPP2R2AP63151 447 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 EMX2Q04743 252 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 EIF2S3LQ2VIR3 472 aaKnown RBP15.8■□□□□ 0.12
PUF60-201ENST00000313352 C6orf163Q5TEZ5 329 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 ATG16L1Q676U5 607 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 FAM180AQ6UWF9 173 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 LARP4Q71RC2 724 aaKnown RBP eCLIP15.8■□□□□ 0.121e-18■■■■■ 35.5
PUF60-201ENST00000313352 FAM9CQ8IZT9 166 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 OR10G3Q8NGC4 313 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 PPCDCQ96CD2 204 aa15.8■□□□□ 0.12
PUF60-201ENST00000313352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.8■□□□□ 0.12
PUF60-201ENST00000313352 WBP11Q9Y2W2 641 aaKnown RBP15.8■□□□□ 0.12
PUF60-201ENST00000313352 SVILO95425 2214 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 UPK1AO00322 258 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 ZNF195O14628 629 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 SCAMP2O15127 329 aaKnown RBP15.79■□□□□ 0.12
PUF60-201ENST00000313352 VPS4BO75351 444 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 ALDOCP09972 364 aaKnown RBP15.79■□□□□ 0.12
PUF60-201ENST00000313352 PIGAP37287 484 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 MEOX1P50221 254 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 CDK9P50750 372 aaKnown RBP15.79■□□□□ 0.12
PUF60-201ENST00000313352 FBXW4P57775 412 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 SRSF1Q07955 248 aaKnown RBP eCLIP15.79■□□□□ 0.12
PUF60-201ENST00000313352 SLC9B1Q4ZJI4 515 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 PRAMEF20Q5VT98 475 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 BICRALQ6AI39 1079 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 TMEM125Q96AQ2 219 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 SLX1AQ9BQ83 275 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 OLAHQ9NV23 265 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 VPS4AQ9UN37 437 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 PCDHGB6Q9Y5F9 930 aa15.79■□□□□ 0.12
PUF60-201ENST00000313352 ASPDHA6ND91 283 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 PDPK1O15530 556 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 PEX1O43933 1283 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 NTSP30990 170 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 DNASE1L1P49184 302 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 NPSR1Q6W5P4 371 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 RIMKLAQ8IXN7 391 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 HORMAD2Q8N7B1 307 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 BCORP1Q8N888 145 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 TMEM178AQ8NBL3 297 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 OR4N2Q8NGD1 307 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 RAB3IL1Q8TBN0 382 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 SLC22A8Q8TCC7 542 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 NR4A3Q92570 626 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 SPACA9Q96E40 222 aaPredicted RBP15.78■□□□□ 0.12
PUF60-201ENST00000313352 ELP4Q96EB1 424 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 PROK2Q9HC23 129 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 SH2D2AQ9NP31 389 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 COL12A1Q99715 3063 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 C9JVG2 144 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 KLF11O14901 512 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 PLOD3O60568 738 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 CT45A8P0DMV1 189 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 CT45A9P0DMV2 189 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 FRKP42685 505 aaPredicted RBP15.78■□□□□ 0.12
PUF60-201ENST00000313352 ASMTP46597 345 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 NME5P56597 212 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 KCNK10P57789 538 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 CT45A2Q5DJT8 189 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 HLA-DQA1Q5Y7H0 255 aa15.78■□□□□ 0.12
PUF60-201ENST00000313352 OPN5Q6U736 354 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms