RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 AQP11Q8NBQ7 271 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 RELTQ969Z4 430 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 OTULINQ96BN8 352 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 C7orf34Q96L11 122 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 APOBEC3BQ9UH17 382 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 TPRKBQ9Y3C4 175 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 PCDHGB3Q9Y5G1 929 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 LOC105369274A0A096LPK9 316 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 LOC102723532A0A0G2JNH3 316 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SDC3O75056 442 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 LDB3O75112 727 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 IFNW1P05000 195 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 HMGN2P05204 90 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 UQCRC2P22695 453 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 NTSP30990 170 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 PCGF2P35227 344 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 REEP5Q00765 189 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 GPR18Q14330 331 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 UBXN2BQ14CS0 331 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 KIAA1161Q6NSJ0 714 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 REEP3Q6NUK4 255 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 OR4N4Q8N0Y3 316 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 FAM3CQ92520 227 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 ZG16BQ96DA0 208 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SLC35G5Q96KT7 338 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 RDH12Q96NR8 316 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SMAD5Q99717 465 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 PCBD2Q9H0N5 130 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 IL21RQ9HBE5 538 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SLC35C2Q9NQQ7 365 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 NECTIN3Q9NQS3 549 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SEMA3GQ9NS98 782 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 USE1Q9NZ43 259 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 APOL3O95236 402 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 SEMA4FO95754 770 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 AIFM1O95831 613 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 GABRG2P18507 467 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 TNFRSF4P43489 277 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 MLLT1Q03111 559 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 VEZF1Q14119 521 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 ZC3H14Q6PJT7 736 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 BCDIN3DQ7Z5W3 292 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 QRFPRQ96P65 431 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 FBXO8Q9NRD0 319 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 TMEM74BQ9NUR3 256 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 ERVK13-1Q9NX77 482 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 QPCTLQ9NXS2 382 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 IL20RAQ9UHF4 553 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
TRAFD1-201ENST00000257604 HIST1H1TP22492 207 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 GADD45AP24522 165 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 RPL3P39023 403 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 CTSKP43235 329 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 PPP5CP53041 499 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 SRP54P61011 504 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 MSANTD1Q6ZTZ1 278 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 PARGQ86W56 976 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 CCDC71Q8IV32 467 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 OR5T3Q8NGG3 340 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 HRASLS2Q9NWW9 162 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 NAALAD2Q9Y3Q0 740 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 PNMA8CA0A1B0GUJ8 204 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 LRRC72A6NJI9 287 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 HNRNPA2B1P22626 353 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 PKLRP30613 574 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 RYKP34925 604 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 AVPR1BP47901 424 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 IFITM2Q01629 132 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 ARHGAP19Q14CB8 494 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 LACC1Q8IV20 430 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 APOL4Q9BPW4 351 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 OR51E2Q9H255 320 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 ADAP2Q9NPF8 381 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 MKLN1Q9UL63 735 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 DUSP12Q9UNI6 340 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 TRBV4-1A0A0J9YWV2 114 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 CLDN24A6NM45 220 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 NPIPB8E9PQR5 432 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 SLC16A6O15403 523 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 ASNA1O43681 348 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 AIREO43918 545 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 GRK5P34947 590 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 ALG11Q2TAA5 492 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 LRIT3Q3SXY7 679 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 CCNJQ5T5M9 372 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 FRMPD2BQ6IN97 320 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 TSEN54Q7Z6J9 526 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 WDR34Q96EX3 536 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 CNRIP1Q96F85 164 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 NECTIN4Q96NY8 510 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 TREX2Q9BQ50 279 aaPredicted RBP13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 FAIM2Q9BWQ8 316 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 DUSP21Q9H596 190 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 PELI2Q9HAT8 420 aa13.81□□□□□ -0.2
TRAFD1-201ENST00000257604 RGS5O15539 181 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms