RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SECISBP2Q96T21 854 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SMCO4Q9NRQ5 59 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 UBQLN2Q9UHD9 624 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLC45A1Q9Y2W3 748 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TRAV6A0A075B6T7 132 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1W2PP55 124 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 UBFD1O14562 309 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 EMC8O43402 210 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 AOC2O75106 756 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OLFM2O95897 454 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 HNRNPA1P09651 372 aaKnown RBP eCLIP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 DEFA4P12838 97 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CD9P21926 228 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 HOXA10P31260 410 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 DIO3P55073 304 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CSNK2A1P68400 391 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 DCST2Q5T1A1 773 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLX4IPQ5VYV7 408 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 AGTRAPQ6RW13 159 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 C16orf78Q8WTQ4 265 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 REEP4Q9H6H4 257 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CCSER2Q9H7U1 834 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLC7A8Q9UHI5 535 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MAFBQ9Y5Q3 323 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 XPNPEP2O43895 674 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PRAMEF2O60811 474 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 EPHA1P21709 976 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PTGER4P35408 488 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RPL23AP62750 156 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PHC1P78364 1004 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HHEXQ03014 270 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 KCNJ11Q14654 390 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 MOGQ16653 247 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF783Q6ZMS7 281 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 KIF18BQ86Y91 864 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 BEST3Q8N1M1 668 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PYROXD2Q8N2H3 581 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PXYLP1Q8TE99 480 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HAS1Q92839 578 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CD244Q9BZW8 370 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DCSTAMPQ9H295 470 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF286AQ9HBT8 521 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF160Q9HCG1 818 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PLEKHJ1Q9NW61 149 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 BOKQ9UMX3 212 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ERVK-19Q9WJR5 959 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RNF6Q9Y252 685 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RNF212BA8MTL3 300 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 M0R233 179 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GPR25O00155 361 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CASC3O15234 703 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LATO43561 262 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LYPLA2O95372 231 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZIC2O95409 532 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SERPINE2P07093 398 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ICAM2P13598 275 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GLB1P16278 677 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 POU3F2P20265 443 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CYCSP99999 105 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NPRL3Q12980 569 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SERTAD2Q14140 314 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PRAMEF8Q5VWM4 474 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PRAMEF7Q5VXH5 474 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 USP53Q70EK8 1073 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TMPRSS12Q86WS5 348 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 C1orf127Q8N9H9 656 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RBM15BQ8NDT2 890 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SAT2Q96F10 170 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CNN2Q99439 309 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SDCBP2Q9H190 292 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZBTB20Q9HC78 741 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OBP2BQ9NPH6 170 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PCYT1BQ9Y5K3 369 aaPredicted RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 H7C1Q1 480 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 MANBAO00462 879 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HTR3BO95264 441 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SEMA4FO95754 770 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 HLA-DQB2P05538 268 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 TFPTP0C1Z6 253 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 EBLN1P0CF75 366 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR12D1P0DN82 309 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 C5AR1P21730 350 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 LMO2P25791 158 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NPBWR1P48145 328 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 RAB15P59190 212 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PCBD1P61457 104 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DSC1Q08554 894 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 DAG1Q14118 895 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CNN3Q15417 329 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NKPD1Q17RQ9 610 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PAN3Q58A45 887 aaKnown RBP5.31□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF767PQ75MW2 155 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 SHFQ7M4L6 423 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 GOLGA7Q7Z5G4 137 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 FBXL16Q8N461 479 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 OR51Q1Q8NH59 317 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 NPLOC4Q8TAT6 608 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 PEX13Q92968 403 aa5.31□□□□□ -1.56
SCN1A-209ENST00000635750 CPEB1Q9BZB8 566 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms