RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TMEM89A2RUT3 159 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 TRIM64CA6NLI5 447 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 MPHOSPH10O00566 681 aaKnown RBP1.95□□□□□ -2.1
TARDBP-220ENST00000618606 LRP3O75074 770 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SEMA4FO95754 770 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 GAS8O95995 478 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CXCL10P02778 98 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 RPLP0P05388 317 aaKnown RBP1.95□□□□□ -2.1
TARDBP-220ENST00000618606 PGK2P07205 417 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 TSPY4P0CV99 314 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 TSPY10P0CW01 314 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 ADORA3P0DMS8 318 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 C4BPBP20851 252 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 DNAJB1P25685 340 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 OR1D2P34982 312 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SFTPDP35247 375 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CLDN17P56750 224 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SLC3A1Q07837 685 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CETN1Q12798 172 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 INAQ16352 499 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 MAJINQ3KP22 176 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 HSP90AA5PQ58FG0 334 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 ARMCX4Q5H9R4 360 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 NHLRC3Q5JS37 347 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 FGD3Q5JSP0 725 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 RAET1GQ6H3X3 334 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SULT1C3Q6IMI6 304 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SLC25A24Q6NUK1 477 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 C17orf107Q6ZR85 190 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 TMEM26Q6ZUK4 368 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 PPP1R42Q7Z4L9 355 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 TAF8Q7Z7C8 310 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 OR9Q2Q8NGE9 314 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CCDC110Q8TBZ0 833 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SPATA18Q8TC71 538 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SLC26A7Q8TE54 656 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SELENOMQ8WWX9 145 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CASP10Q92851 521 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SLCO4A1Q96BD0 722 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 MRPL53Q96EL3 112 aaKnown RBP1.95□□□□□ -2.1
TARDBP-220ENST00000618606 DTNBP1Q96EV8 351 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CFAP36Q96G28 342 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 SDHCQ99643 169 aaPredicted RBP1.95□□□□□ -2.1
TARDBP-220ENST00000618606 STRADBQ9C0K7 418 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 TMEM245Q9H330 911 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 RNF121Q9H920 327 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 PALMDQ9NP74 551 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 CNOT2Q9NZN8 540 aaKnown RBP1.95□□□□□ -2.1
TARDBP-220ENST00000618606 ANKMY1Q9P2S6 941 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 IL20RAQ9UHF4 553 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 PILRBQ9UKJ0 227 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 NCKAP1Q9Y2A7 1128 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 ATG4BQ9Y4P1 393 aa1.95□□□□□ -2.1
TARDBP-220ENST00000618606 UBE4BO95155 1302 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TRGV8A0A0C4DH27 118 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 A0A1B0GTH9 108 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 NKX6-3A6NJ46 265 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ZNF732B4DXR9 585 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 F8WDY8 70 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 NPIPA3F8WFD2 350 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 M0R296 226 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ZNF749O43361 778 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 KIF5CO60282 957 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 NOL3O60936 208 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 SCGB2A1O75556 95 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 HOXC4P09017 264 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 MMP10P09238 476 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TPBGLP0DKB5 382 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 HSPA5P11021 654 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ODC1P11926 461 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ZNF32P17041 273 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ARF4P18085 180 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 MARCKSP29966 332 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 MDH1P40925 334 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 MAGEA4P43358 317 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TRPC1P48995 793 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 NLRP11P59045 1033 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 BTG1P62324 171 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 HERV-K104P63124 156 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 RPP38P78345 283 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ELP6Q0PNE2 266 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TSTA3Q13630 321 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 CYLC2Q14093 348 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 GIT2Q14161 759 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 STX1AQ16623 288 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TMEM44Q2T9K0 475 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TIMM50Q3ZCQ8 353 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 USH1GQ495M9 461 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 CMPK2Q5EBM0 449 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 MARC1Q5VT66 337 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ERASQ7Z444 233 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 BNIPLQ7Z465 357 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 SYVN1Q86TM6 617 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 PRUNE1Q86TP1 453 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 LRRC49Q8IUZ0 686 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 SIDT2Q8NBJ9 832 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 TRPV3Q8NET8 790 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 OR56B1Q8NGI3 324 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 OR4C15Q8NGM1 316 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 FLVCR1-AS1Q8TAF5 88 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms