RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SRFBP1Q8NEF9 429 aaKnown RBP6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 OR51A7Q8NH64 312 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 PXYLP1Q8TE99 480 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SNX33Q8WV41 574 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 GAL3ST1Q99999 423 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 PCBD2Q9H0N5 130 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 ASIC5Q9NY37 505 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 KLHL42Q9P2K6 505 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 EXTL2Q9UBQ6 330 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 HS3ST2Q9Y278 367 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC27A6Q9Y2P4 619 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CCL27Q9Y4X3 112 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 CSNK1G3Q9Y6M4 447 aa6.52□□□□□ -1.37
SYNPO2-206ENST00000610556 MEIOCA2RUB1 952 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 FAM183AA6NL82 134 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 RIIAD1A6NNX1 92 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SOBPA7XYQ1 873 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 HCN1O60741 890 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 PRKRAO75569 313 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 RASGRP1O95267 797 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 VNN2O95498 520 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 NUDT14O95848 222 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 IFNA16P05015 189 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 ARAFP10398 606 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 NPPBP16860 134 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CMPK1P30085 196 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC9A3P48764 834 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 MPP7Q5T2T1 576 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 PODNL1Q6PEZ8 512 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GDPD3Q7L5L3 318 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SAMD12Q8N8I0 201 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 COX18Q8N8Q8 333 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 OR4C6Q8NH72 309 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 FKBP10Q96AY3 582 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 PAWRQ96IZ0 340 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CAMK1GQ96NX5 476 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 NECTIN4Q96NY8 510 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 OR4K3Q96R72 315 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CPEB1Q9BZB8 566 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SLIRPQ9GZT3 109 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 KCNN2Q9H2S1 579 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 HCN2Q9UL51 889 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 PADI2Q9Y2J8 665 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 WDR45Q9Y484 360 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 N6AMT1Q9Y5N5 214 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 FAM172BPA6NC97 362 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 INMT-MINDY4F8WBC2 141 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GFYI3L273 518 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 K7ESM1 405 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 MRPS14O60783 128 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 REM1O75628 298 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 ABLIM3O94929 683 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 HMGN2P05204 90 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 IL7P13232 177 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SYN1P17600 705 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 PCMT1P22061 227 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 RPS19P39019 145 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GCGRP47871 477 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 FBXW4P57775 412 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 TRAM2Q15035 370 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 BTBD16Q32M84 506 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 OR6K6Q8NGW6 343 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CHTF18Q8WVB6 975 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 RERGQ96A58 199 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 COQ8BQ96D53 544 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 NEDD4LQ96PU5 975 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 TREX2Q9BQ50 279 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CCDC32Q9BV29 185 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 LMAN2LQ9H0V9 348 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 FBXO8Q9NRD0 319 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 UGT2A1Q9Y4X1 527 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 TRBV5-4A0A0C4DH59 114 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 TRIM64CA6NLI5 447 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 OR52A4PA6NMU1 304 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 WASHC1A8K0Z3 465 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GAPDHSO14556 408 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 KHDRBS3O75525 346 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 HLA-DQA2P01906 255 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 ASGR2P07307 311 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC35G6P0C7Q6 338 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GNSP15586 552 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SPNP16150 400 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 DDCP20711 480 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 ZNF10P21506 573 aaPredicted RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 HOXA9P31269 272 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 ACVR1BP36896 505 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GIPRP48546 466 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 BNC1Q01954 994 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 NDUFA9Q16795 377 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SNAP47Q5SQN1 464 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 PRPF38BQ5VTL8 546 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 WASH2PQ6VEQ5 465 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 SLC9B2Q86UD5 537 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 OR8H3Q8N146 312 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CPXM2Q8N436 756 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 GRPEL2Q8TAA5 225 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 CDADC1Q9BWV3 514 aa6.51□□□□□ -1.37
SYNPO2-206ENST00000610556 OR2B2Q9GZK3 357 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms