RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 FRMD6-AS1P0C7T7 363 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PRKAR1AP10644 381 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 GNB3P16520 340 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 VCLP18206 1134 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 EFNA1P20827 205 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-216ENST00000593223 CPN2P22792 545 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 ACP1P24666 158 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 CHRNA7P36544 502 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 MAGEA1P43355 309 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 UBE2HP62256 183 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 UBE2IP63279 158 aaKnown RBP4.38□□□□□ -1.71
SMAD4-216ENST00000593223 RPP38P78345 283 aaKnown RBP4.38□□□□□ -1.71
SMAD4-216ENST00000593223 LCP2Q13094 533 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 GPR17Q13304 367 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 COTL1Q14019 142 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 CCDC6Q16204 474 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 ZSCAN26Q16670 478 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 NADK2Q4G0N4 442 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PHLDA2Q53GA4 152 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 C6orf136Q5SQH8 315 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 FAM91A1Q658Y4 838 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 C1orf186Q6ZWK4 172 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 SLC16A9Q7RTY1 509 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 NANOGNBQ7Z5D8 188 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 BIVMQ86UB2 503 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF410Q86VK4 478 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 TMEM139Q8IV31 216 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 EFCAB13Q8IY85 973 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 DNAAF3Q8N9W5 541 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 BBS1Q8NFJ9 593 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 DBF4BQ8NFT6 615 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 OR2T34Q8NGX1 318 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 OR52J3Q8NH60 311 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 FGFBP3Q8TAT2 258 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 DDI1Q8WTU0 396 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 CHURC1Q8WUH1 139 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 NT5C3BQ969T7 300 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 SGK3Q96BR1 496 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 INPP5KQ9BT40 448 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 URM1Q9BTM9 101 aaKnown RBP4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PKIBQ9C010 78 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 MIS12Q9H081 205 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 TSPYL1Q9H0U9 437 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PSTPIP2Q9H939 334 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 GPN1Q9HCN4 374 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PIH1D3Q9NQM4 214 aaKnown RBP4.38□□□□□ -1.71
SMAD4-216ENST00000593223 SPG21Q9NZD8 308 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 OR6C2Q9NZP2 312 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 KCNN3Q9UGI6 736 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 IL17BQ9UHF5 180 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 TSPAN16Q9UKR8 245 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 NUDCQ9Y266 331 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 PADI2Q9Y2J8 665 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 ATP6V1DQ9Y5K8 247 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 ROCK1Q13464 1354 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 NPC1L1Q9UHC9 1359 aa4.38□□□□□ -1.71
SMAD4-216ENST00000593223 KDM3BQ7LBC6 1761 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 IGHV4-61A0A0C4DH41 118 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 ANKRD61A6NGH8 418 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SDR42E2A6NKP2 422 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CYSRT1A8MQ03 144 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SPECC1L-ADORA2AF8WAN1 911 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 DNALI1O14645 258 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 PRRG1O14668 218 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SULT1B1O43704 296 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 TRIM3O75382 744 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 PRDM1O75626 825 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 WDPCPO95876 746 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 IGHV4-59P01825 116 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 YES1P07947 543 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 LINGO3P0C6S8 592 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CCL5P13501 91 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CA4P22748 312 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 U2AF2P26368 475 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 MNDAP41218 407 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 FRKP42685 505 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CLCN4P51793 760 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 GNB1P62873 340 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CSNK2BP67870 215 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 TPM4P67936 248 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 TRAP1Q12931 704 aaKnown RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CEBPEQ15744 281 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CES3Q6UWW8 571 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 C11orf57Q6ZUT1 292 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SIAH3Q8IW03 269 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 MFN1Q8IWA4 741 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SLC43A2Q8N370 569 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 TCAIMQ8N3R3 496 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 WDSUB1Q8N9V3 476 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 CLHC1Q8NHS4 586 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 C9orf43Q8TAL5 461 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 HCAR2Q8TDS4 363 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 U2AF1L4Q8WU68 220 aaKnown RBP4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SSMEM1Q8WWF3 244 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
SMAD4-216ENST00000593223 SUSD6Q92537 303 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms