RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 AP3S1Q92572 193 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 GLG1Q92896 1179 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 NKD2Q969F2 451 aaPredicted RBP2.9□□□□□ -1.94
CHD9-216ENST00000565803 LHX4Q969G2 390 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 VPS35Q96QK1 796 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 OR2A14Q96R47 310 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 PFDN5Q99471 154 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 FMO2Q99518 471 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 COPS8Q99627 209 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 PIGQQ9BRB3 760 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 SGPP1Q9BX95 441 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 SLC46A2Q9BY10 475 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 ULBP1Q9BZM6 244 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 PIGMQ9H3S5 423 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 KCNK15Q9H427 330 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 ENTPD7Q9NQZ7 604 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 C19orf12Q9NSK7 152 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 C1orf123Q9NWV4 160 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 DPP3Q9NY33 737 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 TAS2R9Q9NYW1 312 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 PALD1Q9ULE6 856 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 POFUT2Q9Y2G5 429 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 SLC27A6Q9Y2P4 619 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 YBX2Q9Y2T7 364 aaKnown RBP2.9□□□□□ -1.94
CHD9-216ENST00000565803 COL4A2P08572 1712 aa2.9□□□□□ -1.94
CHD9-216ENST00000565803 MYO16Q9Y6X6 1858 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 A0A0J9YVX5 310 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 CDHR4A6H8M9 788 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 H0YIG0 161 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 FLRT2O43155 660 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SUV39H1O43463 412 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SCELO95171 688 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 ANP32DO95626 131 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SNAP29O95721 258 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 FAM228BP0C875 321 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 CYBAP13498 195 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 ZNF182P17025 639 aaPredicted RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 ZNF37AP17032 561 aaPredicted RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 NAGAP17050 411 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 HLA-DMAP28067 261 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 HOXD9P28356 352 aaPredicted RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 AKR1D1P51857 326 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 PSME3P61289 254 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 RPL23AP62750 156 aaKnown RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 RPL10AP62906 217 aaKnown RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 MRPS22P82650 360 aaKnown RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 CTBSQ01459 385 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SLC34A1Q06495 639 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 CCNYL2Q5T2Q4 361 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SUSD4Q5VX71 490 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 ANKRD16Q6P6B7 361 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 ZNF841Q6ZN19 808 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SYT9Q86SS6 491 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 GABRG1Q8N1C3 465 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 TRAM1L1Q8N609 369 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 CPEB3Q8NE35 698 aaKnown RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 ZNF680Q8NEM1 530 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 OR1L6Q8NGR2 347 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 VANGL1Q8TAA9 524 aaPredicted RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 HCAR2Q8TDS4 363 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 RAB40AQ8WXH6 277 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 DAZLQ92904 295 aaKnown RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 ASB9Q96DX5 294 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 NUDT11Q96G61 164 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 ZNF274Q96GC6 653 aaPredicted RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 RANBP9Q96S59 729 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 CPPED1Q9BRF8 314 aaPredicted RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 NUAK2Q9H093 628 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 TPK1Q9H3S4 243 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SMOC2Q9H3U7 446 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 KCNK12Q9HB15 430 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 ANKHQ9HCJ1 492 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 IL23AQ9NPF7 189 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 EXD2Q9NVH0 621 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 SERTAD3Q9UJW9 196 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 NFU1Q9UMS0 254 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 TNNQ9UQP3 1299 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 FARSAQ9Y285 508 aaKnown RBP2.9□□□□□ -1.95
CHD9-216ENST00000565803 STARD10Q9Y365 291 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 PPIL1Q9Y3C6 166 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 CACNG2Q9Y698 323 aa2.9□□□□□ -1.95
CHD9-216ENST00000565803 BCLAF3A2AJT9 711 aaKnown RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 M0QZ24 198 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 PDHXO00330 501 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 DLGAP1O14490 977 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 SNAI2O43623 268 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 JRKO75564 520 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 ITGA10O75578 1167 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 LRIG2O94898 1065 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 C8AP07357 584 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 TMEM225BP0DP42 221 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 SPP1P10451 314 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 POLR2CP19387 275 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 PTGS1P23219 599 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 NMBRP28336 390 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 KDELR2P33947 212 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 RFX3P48380 749 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 COMPP49747 757 aaPredicted RBP2.89□□□□□ -1.95
CHD9-216ENST00000565803 RAG2P55895 527 aa2.89□□□□□ -1.95
CHD9-216ENST00000565803 RPL15P61313 204 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms