RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 HNRNPCL2B2RXH8 293 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 HNRNPCL3B7ZW38 293 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 DNAJB6O75190 326 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 COQ9O75208 318 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 ERAL1O75616 437 aaKnown RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 HNRNPCL4P0DMR1 293 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 CSTF2P33240 577 aaKnown RBP eCLIP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 CHI3L1P36222 383 aaPredicted RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 PRIM2P49643 509 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 CRYBA2P53672 197 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 SELENOWP63302 87 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 MRPS22P82650 360 aaKnown RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 SHC2P98077 582 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 CDK6Q00534 326 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 RHAGQ02094 409 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 DUSP2Q05923 314 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 MAPK11Q15759 364 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 GPR19Q15760 415 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 CCDC6Q16204 474 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 IQCCQ4KMZ1 466 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 FAM98BQ52LJ0 330 aaKnown RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 OGFRL1Q5TC84 451 aaPredicted RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 TCEAL6Q6IPX3 200 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 DNAJC14Q6Y2X3 702 aaPredicted RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 OVCH1Q7RTY7 1134 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 SPATA24Q86W54 205 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 PPP1R3BQ86XI6 285 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 RNF130Q86XS8 419 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 ANKFN1Q8N957 763 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 CDRT4Q8N9R6 151 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 TMEM52Q8NDY8 209 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 OR5T3Q8NGG3 340 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 OR2I1PQ8NGU4 316 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 SLC38A5Q8WUX1 472 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 APOBEC4Q8WW27 367 aaKnown RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 UCN3Q969E3 161 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 TCEAL3Q969E4 200 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 PYURFQ96I23 114 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 LMF2Q9BU23 707 aaKnown RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 EDEM2Q9BV94 578 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 SPATA5L1Q9BVQ7 753 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 DDA1Q9BW61 102 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 SPRY4Q9C004 299 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 PIGUQ9H490 435 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 PRTFDC1Q9NRG1 225 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 RXFP3Q9NSD7 469 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 ZCCHC3Q9NUD5 404 aaKnown RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 NKX1-2Q9UD57 310 aaPredicted RBP10.19□□□□□ -0.78
PABPN1-203ENST00000553960 PADI2Q9Y2J8 665 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 LRRC42Q9Y546 428 aa10.19□□□□□ -0.78
PABPN1-203ENST00000553960 TMEM247A6NEH6 219 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 GLOD5A6NK44 160 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 SYT5O00445 386 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 GSTA4O15217 222 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 NKX2-2O95096 273 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 RECKO95980 971 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 IGKV3-11P04433 115 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 HMGN2P05204 90 aaKnown RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 TCN1P20061 433 aaPredicted RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 CSRP1P21291 193 aaKnown RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 MSX2P35548 267 aaPredicted RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 VHLP40337 213 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 XCR1P46094 333 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 SEPHS1P49903 392 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 SIM1P81133 766 aaPredicted RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 DCDP81605 110 aaKnown RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 CHRNB3Q05901 458 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 HSPB3Q12988 150 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 TP53BP2Q13625 1128 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 SCARB2Q14108 478 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 KCNAB1Q14722 419 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 ELAVL1Q15717 326 aaKnown RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 ATP6AP1Q15904 470 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 COX20Q5RI15 118 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 IGF2-ASQ6U949 168 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 CEACAM20Q6UY09 585 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 LRRC74BQ6ZQY2 392 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 PRR23CQ6ZRP0 262 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 TTLL10Q6ZVT0 673 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 DGLUCYQ7Z3D6 616 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 SPPL2CQ8IUH8 684 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 ARMC8Q8IUR7 673 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 HORMAD2Q8N7B1 307 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 NUP43Q8NFH3 380 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 OR7G2Q8NG99 324 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 BBS10Q8TAM1 723 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 NETO1Q8TDF5 533 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 MMABQ96EY8 250 aaPredicted RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 NRBF2Q96F24 287 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 CENPNQ96H22 339 aaPredicted RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 RBM18Q96H35 190 aaKnown RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 FBXL20Q96IG2 436 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 RSRC1Q96IZ7 334 aaKnown RBP10.18□□□□□ -0.78
PABPN1-203ENST00000553960 ART5Q96L15 291 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 CMKLR1Q99788 373 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 DOHHQ9BU89 302 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 SERHL2Q9H4I8 314 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
PABPN1-203ENST00000553960 ADAP2Q9NPF8 381 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms