RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 CDH3P22223 829 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 VSX2P58304 361 aaPredicted RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 STARD6P59095 220 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 PPP1CAP62136 330 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 OLR1P78380 273 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 SIM1P81133 766 aaPredicted RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 RPL6Q02878 288 aaKnown RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 PMS2P3Q13401 168 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 LTB4RQ15722 352 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 COLEC12Q5KU26 742 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 ATAD3BQ5T9A4 648 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 DEF8Q6ZN54 512 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 IQCHQ86VS3 1027 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 GJD3Q8N144 294 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 CADM4Q8NFZ8 388 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 VANGL1Q8TAA9 524 aaPredicted RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 LMX1AQ8TE12 382 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 APOBEC4Q8WW27 367 aaKnown RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 ZNF566Q969W8 418 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 C16orf58Q96GQ5 468 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 ALPK1Q96QP1 1244 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 OR7D2Q96RA2 312 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 CSF3RQ99062 836 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 NELL2Q99435 816 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 TUBA1CQ9BQE3 449 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 MIR1-1HGQ9H1L0 117 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 DNAAF2Q9NVR5 837 aaKnown RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 RHCGQ9UBD6 479 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 WNT16Q9UBV4 365 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 ENOPH1Q9UHY7 261 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 TMCC3Q9ULS5 477 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 HCN4Q9Y3Q4 1203 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 SLC22A7Q9Y694 548 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 A0A0G2JPF8 293 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 A0A1W2PR77 199 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 HNRNPCL2B2RXH8 293 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 HNRNPCL3B7ZW38 293 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 PCDH17O14917 1159 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 ASNA1O43681 348 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 CPNE6O95741 557 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 HNRNPCL4P0DMR1 293 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 LIMS1P48059 325 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 RGS19P49795 217 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 HMGA2P52926 109 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 MAZP56270 477 aaKnown RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 SNRPNP63162 240 aaKnown RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 RAB39AQ14964 217 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 PRAMEF8Q5VWM4 474 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 PRAMEF7Q5VXH5 474 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 SIX5Q8N196 739 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 COL26A1Q96A83 441 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 CDX2Q99626 313 aaPredicted RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 PSD2Q9BQI7 771 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 BTBD2Q9BX70 525 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 ACTRT3Q9BYD9 372 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 CXorf21Q9HAI6 301 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 FANCEQ9HB96 536 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 SCN3BQ9NY72 215 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 CALML5Q9NZT1 146 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 KCND3Q9UK17 655 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 SLC9A8Q9Y2E8 581 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 MRPS2Q9Y399 296 aaKnown RBP13.98□□□□□ -0.17
TSFM-207ENST00000540550 TPRKBQ9Y3C4 175 aa13.98□□□□□ -0.17
TSFM-207ENST00000540550 TMEM131Q92545 1883 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 ARRDC5A6NEK1 342 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 TLR4O00206 839 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 UBXN7O94888 489 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 CHRM4P08173 479 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 FMO3P31513 532 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 SMIM11AP58511 58 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 RACK1P63244 317 aaKnown RBP13.97□□□□□ -0.17
TSFM-207ENST00000540550 FOXD4Q12950 439 aaPredicted RBP13.97□□□□□ -0.17
TSFM-207ENST00000540550 MAD2L1BPQ15013 274 aaPredicted RBP13.97□□□□□ -0.17
TSFM-207ENST00000540550 C11orf91Q3C1V1 193 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 FGD3Q5JSP0 725 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 LAIR2Q6ISS4 152 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 C16orf62Q7Z3J2 963 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 ZNF438Q7Z4V0 828 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 B3GNT8Q7Z7M8 397 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 ALDH16A1Q8IZ83 802 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 C19orf47Q8N9M1 422 aaKnown RBP13.97□□□□□ -0.17
TSFM-207ENST00000540550 OR9Q2Q8NGE9 314 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 MPP4Q96JB8 637 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 HRASLS5Q96KN8 279 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 MS4A4EQ96PG1 132 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 RLIMQ9NVW2 624 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 LIPT1Q9Y234 373 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 NAALAD2Q9Y3Q0 740 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 SCN2AQ99250 2005 aa13.97□□□□□ -0.17
TSFM-207ENST00000540550 PTGES3LE9PB15 166 aa13.96□□□□□ -0.17
TSFM-207ENST00000540550 STK25O00506 426 aa13.96□□□□□ -0.17
TSFM-207ENST00000540550 NOL3O60936 208 aaKnown RBP13.96□□□□□ -0.17
TSFM-207ENST00000540550 CPMP14384 443 aa13.96□□□□□ -0.17
TSFM-207ENST00000540550 FOSL2P15408 326 aa13.96□□□□□ -0.17
TSFM-207ENST00000540550 ST6GAL1P15907 406 aa13.96□□□□□ -0.17
TSFM-207ENST00000540550 JUNBP17275 347 aaPredicted RBP13.96□□□□□ -0.17
TSFM-207ENST00000540550 MAOBP27338 520 aa13.96□□□□□ -0.17
TSFM-207ENST00000540550 EPHA2P29317 976 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms