RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PLPP1O14494 284 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 ZNF197O14709 1029 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CRYZL1O95825 349 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 SRPRAP08240 638 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 ADH5P11766 374 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CRYBB2P43320 205 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 LIM2P55344 173 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 KRR1Q13601 381 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 GAB4Q2WGN9 574 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 PRR23CQ6ZRP0 262 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 DEDD2Q8WXF8 326 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CCDC120Q96HB5 630 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 HDHD5Q9BXW7 423 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 PLCXD1Q9NUJ7 323 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 CMAHPQ9Y471 501 aa11.9□□□□□ -0.5
SFSWAP-208ENST00000539506 DVL2O14641 736 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 PLA2G10O15496 165 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 CRISP1P54107 249 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 P2RX3P56373 397 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 SCN1BQ07699 218 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 TATDN3Q17R31 274 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 APOBEC4Q8WW27 367 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 OTULINQ96BN8 352 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 MAP6Q96JE9 813 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 RNF170Q96K19 258 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 FRMD6Q96NE9 622 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 GALNT9Q9HCQ5 603 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 IL20RAQ9UHF4 553 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 HMX3A6NHT5 357 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 WASHC1A8K0Z3 465 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 TLR4O00206 839 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 STATHP02808 62 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ANXA8P13928 327 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 PSMB5P28074 263 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 IFNA8P32881 189 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 DDOSTP39656 456 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 PSPHP78330 225 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 LARS2Q15031 903 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 WASH2PQ6VEQ5 465 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ASB18Q6ZVZ8 466 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ETFBKMTQ8IXQ9 262 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 OXR1Q8N573 874 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 SPPL3Q8TCT6 385 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ART5Q96L15 291 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 LGR4Q9BXB1 951 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 LHX9Q9NQ69 397 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 KLK4Q9Y5K2 254 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 CENPBD1B2RD01 187 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 YES1P07947 543 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ARAFP10398 606 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ADRB3P13945 408 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 IL12RB1P42701 662 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ALDH9A1P49189 494 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 HMGA2P52926 109 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 LIMK1P53667 647 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 RPS25P62851 125 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 OLR1P78380 273 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 RBBP4Q09028 425 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 FBXO43Q4G163 708 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 CRTC2Q53ET0 693 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 SAXO2Q658L1 398 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF770Q6IQ21 691 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF367Q7RTV3 350 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 SLC9B2Q86UD5 537 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 PDZD3Q86UT5 571 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 AMIGO1Q86WK6 493 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 HORMAD2Q8N7B1 307 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 OR2L2Q8NH16 312 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF707Q96C28 371 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 LINC00615Q96LM1 132 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 F2RL3Q96RI0 385 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 DCLRE1CQ96SD1 692 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 PIP5K1AQ99755 562 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 TSSK6Q9BXA6 273 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 HCN4Q9Y3Q4 1203 aa11.89□□□□□ -0.51
SFSWAP-208ENST00000539506 FEZF1A0PJY2 475 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 CARNS1A5YM72 827 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 PLOD3O60568 738 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 CH25HO95992 272 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 SYPP08247 313 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 ITGA2P17301 1181 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 POU3F3P20264 500 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 ITGB7P26010 798 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 MLLT1Q03111 559 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 MAP4K2Q12851 820 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 PIN1Q13526 163 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 SLX4IPQ5VYV7 408 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 AMER3Q8N944 861 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 DENND6BQ8NEG7 585 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 WACQ9BTA9 647 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 TBC1D17Q9HA65 648 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 SSR3Q9UNL2 185 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 MAPRE3Q9UPY8 281 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms