RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 ISL2Q96A47 359 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 C18orf12Q96KH6 178 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SERPINI1Q99574 410 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TM9SF2Q99805 663 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SH3GL2Q99962 352 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 RBM24Q9BX46 236 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 PRDM14Q9GZV8 571 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 LIME1Q9H400 295 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 BEX4Q9NWD9 120 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TEX10Q9NXF1 929 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TRMT1Q9NXH9 659 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 PSME2Q9UL46 239 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 C15orf41Q9Y2V0 281 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SNX24Q9Y343 169 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TNPO3Q9Y5L0 923 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SAR1BQ9Y6B6 198 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 IKBKGQ9Y6K9 419 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 GLOD5A6NK44 160 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 CLCA1A8K7I4 914 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 H0Y3Z8 333 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 UBXN8O00124 270 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 HRKO00198 91 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 PLPP1O14494 284 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 HPNP05981 417 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 INHBBP09529 407 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 NT5EP21589 574 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 SSTR1P30872 391 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 STX2P32856 288 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 ZNF136P52737 540 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 HNRNPH2P55795 449 aaKnown RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 FBXW4P57775 412 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 DCAF7P61962 342 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 RPS13P62277 151 aaKnown RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 LTBQ06643 244 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 GAB1Q13480 694 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 NAB1Q13506 487 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 CUL3Q13618 768 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 E2F2Q14209 437 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 CPSF6Q16630 551 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 NHSL2Q5HYW2 709 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 C10orf62Q5T681 223 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 VASNQ6EMK4 673 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 SLC30A6Q6NXT4 461 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 CYS1Q717R9 158 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 ISCA2Q86U28 154 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 PPM1NQ8N819 430 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 LINC01560Q8TB33 94 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 ZPLD1Q8TCW7 415 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 DOK4Q8TEW6 326 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 TMEM41AQ96HV5 264 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 UBXN10Q96LJ8 280 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 DACH2Q96NX9 599 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 GNRHR2Q96P88 292 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 NAPGQ99747 312 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 WDR83Q9BRX9 315 aaKnown RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 SFXN3Q9BWM7 321 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 SORBS1Q9BX66 1292 aaKnown RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 ANGPTL4Q9BY76 406 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 OR10A5Q9H207 317 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 PIGMQ9H3S5 423 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 DDX31Q9H8H2 851 aaKnown RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-203ENST00000537194 CXorf21Q9HAI6 301 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 PSD3Q9NYI0 1048 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 KLRF1Q9NZS2 232 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 ACOT9Q9Y305 439 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 SLC6A5Q9Y345 797 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 TSC22D4Q9Y3Q8 395 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 NF1P21359 2839 aa8.18□□□□□ -1.1
SMAD3-203ENST00000537194 EXPH5Q8NEV8 1989 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 DSCAMO60469 2012 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 A0A087X1B8 175 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 UQCRHLA0A096LP55 91 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 TCRBV9S1A1TA0A576 114 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 MBD3L4A6NDZ8 208 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 MBD3L3A6NE82 208 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 MBD3L5A6NJ08 208 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 FAM159BA6NKW6 160 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 H0YIV9 168 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 FOXE1O00358 373 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 GNB5O14775 395 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 SEMA3DO95025 777 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 ATE1O95260 518 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 WISP3O95389 354 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 AIFM1O95831 613 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 NAGAP17050 411 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 BMP7P18075 431 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 CHMP24386 653 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 SSTR4P31391 388 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 KRT20P35900 424 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 CASP3P42574 277 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 XKP51811 444 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 ALDH18A1P54886 795 aaKnown RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 GNG11P61952 73 aa8.17□□□□□ -1.1
SMAD3-203ENST00000537194 NKX6-1P78426 367 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-203ENST00000537194 CAV1Q03135 178 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms