RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CHRM4P08173 479 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 SIM1P81133 766 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-210ENST00000517713 RAB39AQ14964 217 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 OR7D2Q96RA2 312 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 PSD2Q9BQI7 771 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 SEMA6CQ9H3T2 930 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 ANKRA2Q9H9E1 313 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 VCX3AQ9NNX9 186 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 TMEM74BQ9NUR3 256 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 WNT16Q9UBV4 365 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 POMT2Q9UKY4 750 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 HCN4Q9Y3Q4 1203 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 TDRD6O60522 2096 aaKnown RBP24.96■■□□□ 1.59
COL13A1-210ENST00000517713 ZNF860A6NHJ4 632 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 FFAR1O14842 300 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 JUNBP17275 347 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-210ENST00000517713 FUT4P22083 530 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 MAOBP27338 520 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 MAZP56270 477 aaKnown RBP24.96■■□□□ 1.59
COL13A1-210ENST00000517713 OLIG3Q7RTU3 272 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 CLVS1Q8IUQ0 354 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-210ENST00000517713 CSNK1A1LQ8N752 337 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 CADM4Q8NFZ8 388 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 OR9Q2Q8NGE9 314 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 HRASLS5Q96KN8 279 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 ALPK1Q96QP1 1244 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 NIPSNAP1Q9BPW8 284 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 TUBA1CQ9BQE3 449 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 SPATA5L1Q9BVQ7 753 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 CXorf21Q9HAI6 301 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 EQTNQ9NQ60 294 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 KCNE3Q9Y6H6 103 aa24.96■■□□□ 1.59
COL13A1-210ENST00000517713 NME1P15531 152 aaKnown RBP24.95■■□□□ 1.58
COL13A1-210ENST00000517713 GPAT3Q53EU6 434 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 COLEC12Q5KU26 742 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 PRSS41Q7RTY9 318 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 TMEFF1Q8IYR6 380 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 ALDH16A1Q8IZ83 802 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 SPARTQ8N0X7 666 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 VANGL1Q8TAA9 524 aaPredicted RBP24.95■■□□□ 1.58
COL13A1-210ENST00000517713 COL26A1Q96A83 441 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 PCED1AQ9H1Q7 454 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 ZNF556Q9HAH1 456 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 A0A0G2JPF8 293 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 HNRNPCL2B2RXH8 293 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 HNRNPCL3B7ZW38 293 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 HNRNPCL4P0DMR1 293 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 VSX2P58304 361 aaPredicted RBP24.95■■□□□ 1.58
COL13A1-210ENST00000517713 LSAMPQ13449 338 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 MAD2L1BPQ15013 274 aaPredicted RBP24.95■■□□□ 1.58
COL13A1-210ENST00000517713 TCTN3Q6NUS6 607 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 GPR153Q6NV75 609 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 B3GNT8Q7Z7M8 397 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 CCDC71Q8IV32 467 aaPredicted RBP24.95■■□□□ 1.58
COL13A1-210ENST00000517713 OR4N5Q8IXE1 308 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 TAGAPQ8N103 731 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 NELL2Q99435 816 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 CCDC3Q9BQI4 270 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 BTBD2Q9BX70 525 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 FANCEQ9HB96 536 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 AASSQ9UDR5 926 aa24.95■■□□□ 1.58
COL13A1-210ENST00000517713 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 PTGES3LE9PB15 166 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 TLR4O00206 839 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 ASNA1O43681 348 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 HTR1AP08908 422 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 ST6GAL1P15907 406 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 FMO3P31513 532 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 SLC5A2P31639 672 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 MAN2A2P49641 1150 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 SH3BGRP55822 239 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-210ENST00000517713 NUP107P57740 925 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 RACK1P63244 317 aaKnown RBP24.94■■□□□ 1.58
COL13A1-210ENST00000517713 COL9A2Q14055 689 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-210ENST00000517713 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-210ENST00000517713 PRAMEF8Q5VWM4 474 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 PRAMEF7Q5VXH5 474 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 USP53Q70EK8 1073 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 IQCHQ86VS3 1027 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 GKN2Q86XP6 184 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 GJD3Q8N144 294 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 OR4D11Q8NGI4 311 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 LMX1AQ8TE12 382 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 GIMAP5Q96F15 307 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 ACTRT3Q9BYD9 372 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 COLQQ9Y215 455 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-210ENST00000517713 SPACA6W5XKT8 324 aa24.94■■□□□ 1.58
COL13A1-210ENST00000517713 ARRDC5A6NEK1 342 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 XPNPEP2O43895 674 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 CXCR4P61073 352 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 RPL6Q02878 288 aaKnown RBP24.93■■□□□ 1.58
COL13A1-210ENST00000517713 FOXD4Q12950 439 aaPredicted RBP24.93■■□□□ 1.58
COL13A1-210ENST00000517713 XAF1Q6GPH4 301 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 DEF8Q6ZN54 512 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 RBM45Q8IUH3 476 aaKnown RBP24.93■■□□□ 1.58
COL13A1-210ENST00000517713 SIX5Q8N196 739 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 OR7G2Q8NG99 324 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 MPP4Q96JB8 637 aa24.93■■□□□ 1.58
COL13A1-210ENST00000517713 NMNAT1Q9HAN9 279 aaPredicted RBP24.93■■□□□ 1.58
COL13A1-210ENST00000517713 PAK1IP1Q9NWT1 392 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms