RNA–Protein interactions for RNA: ENST00000508130.5

SLF1-207, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-207ENST00000508130 CASC4Q6P4E1 433 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 LRRC8BQ6P9F7 803 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 SLC22A25Q6T423 547 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 SPESP1Q6UW49 350 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TIPARPQ7Z3E1 657 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 KLHDC8BQ8IXV7 354 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 DSELQ8IZU8 1212 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 FBXL14Q8N1E6 418 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 CLDN19Q8N6F1 224 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 OTUD6BQ8N6M0 293 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 ARL6IP6Q8N6S5 226 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 HORMAD2Q8N7B1 307 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TTC29Q8NA56 475 aaPredicted RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 GLIS1Q8NBF1 620 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 OR8H1Q8NGG4 311 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 SUN3Q8TAQ9 357 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TMEM255BQ8WV15 326 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 RERGQ96A58 199 aaPredicted RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 MAGOHBQ96A72 148 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 MIB2Q96AX9 1013 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 AGAP4Q96P64 663 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TRAPPC9Q96Q05 1148 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 MAP3K3Q99759 626 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 PITPNM3Q9BZ71 974 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 OR52A5Q9H2C5 316 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 ACTL8Q9H568 366 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 FAM96AQ9H5X1 160 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 WDR54Q9H977 334 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 COG4Q9H9E3 785 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 CLK4Q9HAZ1 481 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 XAB2Q9HCS7 855 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 EIF2B3Q9NR50 452 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 KRT84Q9NSB2 600 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 SACM1LQ9NTJ5 587 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 DECR2Q9NUI1 292 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 INTS10Q9NVR2 710 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 TMEM160Q9NX00 188 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 OGFRQ9NZT2 677 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 MSRB1Q9NZV6 116 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TMEM9Q9P0T7 183 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 RNF14Q9UBS8 474 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 POMT2Q9UKY4 750 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TTC7AQ9ULT0 858 aaPredicted RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 PCDHGB4Q9UN71 923 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 RABL2BQ9UNT1 228 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 WDR37Q9Y2I8 494 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 TDRKHQ9Y2W6 561 aaKnown RBP3.34□□□□□ -1.87
SLF1-207ENST00000508130 FAM169AQ9Y6X4 670 aa3.34□□□□□ -1.87
SLF1-207ENST00000508130 CEP192Q8TEP8 1941 aa3.34□□□□□ -1.88
SLF1-207ENST00000508130 USP24Q9UPU5 2620 aa3.34□□□□□ -1.88
SLF1-207ENST00000508130 KNL1Q8NG31 2342 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 MGAQ8IWI9 3026 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 TNRC6BQ9UPQ9 1833 aaKnown RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 TRPM6Q9BX84 2022 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 A0A0J9YY10 115 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 SLC5A10A0PJK1 596 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 CCDC162PA2VCL2 907 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 CTAGE9A4FU28 777 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 URADA6NGE7 173 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 RRHO14718 337 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ACOT8O14734 319 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ZSCAN9O15535 394 aaPredicted RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 ZNF749O43361 778 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 KIF1CO43896 1103 aaKnown RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 PTP4A3O75365 173 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 GPC4O75487 556 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 TMEM63AO94886 807 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 VAPBO95292 243 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 METTL18O95568 372 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 FTCDO95954 541 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 GOT2P00505 430 aaKnown RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 PLAUP00749 431 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 FGGP02679 453 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 PRB1P04280 392 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 CYC1P08574 325 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ANXA5P08758 320 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ENO3P13929 434 aaPredicted RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 PORP16435 677 aaPredicted RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 TPSB2P20231 275 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 CD9P21926 228 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ACADLP28330 430 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 GABRB3P28472 473 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 RPA3P35244 121 aaPredicted RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 RPL22P35268 128 aaKnown RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 ATP6V1E1P36543 226 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 RGS4P49798 205 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 KPNA2P52292 529 aaKnown RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 PRKAA2P54646 552 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 GFERP55789 205 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 P2RX3P56373 397 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 TIRAPP58753 221 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ACVR1Q04771 509 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 ACTN3Q08043 901 aaPredicted RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 SNX1Q13596 522 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 SCARB2Q14108 478 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 OASLQ15646 514 aaKnown RBP3.33□□□□□ -1.88
SLF1-207ENST00000508130 TPSAB1Q15661 275 aa3.33□□□□□ -1.88
SLF1-207ENST00000508130 NKAIN1Q4KMZ8 207 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms