RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ALDH16A1Q8IZ83 802 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PNPLA1Q8N8W4 532 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PSD4Q8NDX1 1056 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 RPH3AQ9Y2J0 694 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 FAM171A2A8MVW0 826 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 GSRP00390 522 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 RPS3P23396 243 aaKnown RBP eCLIP10.47□□□□□ -0.734e-6■■■■■ 40.4
VAPB-204ENST00000475243 PYCR1P32322 319 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 RPS26P11Q5JNZ5 115 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 PHC2Q8IXK0 858 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ISOC1Q96CN7 298 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 VSTM2BA6NLU5 285 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 TYROBPO43914 113 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SLC35E2BP0CK96 405 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PXNP49023 591 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 DUSP3P51452 185 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 RPS15P62841 145 aaKnown RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 BTBD16Q32M84 506 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ELMOD2Q8IZ81 293 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PIAS4Q8N2W9 510 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 CHST14Q8NCH0 376 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 PRR11Q96HE9 360 aaPredicted RBP10.47□□□□□ -0.73
VAPB-204ENST00000475243 CCDC106Q9BWC9 280 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 ERVK13-1Q9NX77 482 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
VAPB-204ENST00000475243 SDHDO14521 159 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 GRIA2P42262 883 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 GJA8P48165 433 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 CLCA4Q14CN2 919 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 ATG9BQ674R7 924 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 TIGD4Q8IY51 512 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 MVB12BQ9H7P6 319 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 STARD5Q9NSY2 213 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 PRLP01236 227 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 PORP16435 677 aaPredicted RBP10.46□□□□□ -0.73
VAPB-204ENST00000475243 GPR143P51810 404 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 APOFQ13790 326 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 ATAD3CQ5T2N8 411 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 TRIM73Q86UV7 250 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 TREML1Q86YW5 311 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 KLHDC8AQ8IYD2 350 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 NPWQ8N729 165 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 OR8J3Q8NGG0 315 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 ZDHHC1Q8WTX9 485 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 LRR1Q96L50 414 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 IRF2P14316 349 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 SFTPDP35247 375 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 POU3F4P49335 361 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 TBRG1Q3YBR2 411 aa10.46□□□□□ -0.73
VAPB-204ENST00000475243 CCNL2Q96S94 520 aaPredicted RBP10.46□□□□□ -0.73
VAPB-204ENST00000475243 C1orf226A1L170 272 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 CLCA1A8K7I4 914 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.74
VAPB-204ENST00000475243 YY2O15391 372 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 JUPP14923 745 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 NTSR1P30989 418 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 LSSP48449 732 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 RIDAP52758 137 aaKnown RBP10.46□□□□□ -0.74
VAPB-204ENST00000475243 DLX2Q07687 328 aaPredicted RBP10.46□□□□□ -0.74
VAPB-204ENST00000475243 KIAA0319Q5VV43 1072 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 SLC39A5Q6ZMH5 540 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 PRR18Q8N4B5 295 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 NEDD4LQ96PU5 975 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 ZNF649Q9BS31 505 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 NAA11Q9BSU3 229 aaPredicted RBP10.46□□□□□ -0.74
VAPB-204ENST00000475243 SLC17A9Q9BYT1 436 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 TMEM185BQ9H7F4 350 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 SEC14L4Q9UDX3 406 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 BRINP1O60477 761 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 RBMXP38159 391 aaKnown RBP10.46□□□□□ -0.74
VAPB-204ENST00000475243 NIPAL4Q0D2K0 466 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 NIPAL1Q6NVV3 410 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 Q8N402 240 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 RHEBL1Q8TAI7 183 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 SPRYD4Q8WW59 207 aaPredicted RBP10.46□□□□□ -0.74
VAPB-204ENST00000475243 LINC00597Q9H2U6 94 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 B4GALT7Q9UBV7 327 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 NUP98P52948 1817 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 NINQ8N4C6 2090 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 H7C417 338 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 FAAHO00519 579 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 AKR1C4P17516 323 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 LEG1Q6P5S2 330 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.46□□□□□ -0.74
VAPB-204ENST00000475243 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 PRR22Q8IZ63 422 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 OR51L1Q8NGJ5 315 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 OR4K13Q8NH42 304 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 KCNN1Q92952 543 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 INPP5KQ9BT40 448 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 IL23AQ9NPF7 189 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 HCFC1R1Q9NWW0 138 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 KCMF1Q9P0J7 381 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 STYXL1Q9Y6J8 313 aa10.46□□□□□ -0.74
VAPB-204ENST00000475243 P04436 131 aa10.45□□□□□ -0.74
VAPB-204ENST00000475243 FESP07332 822 aa10.45□□□□□ -0.74
VAPB-204ENST00000475243 DCKP27707 260 aa10.45□□□□□ -0.74
VAPB-204ENST00000475243 FRKP42685 505 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms