RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 DNAJB5O75953 348 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ATXN8OSP0DMR3 200 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ALOX12P18054 663 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RHCEP18577 417 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 CD247P20963 164 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 CDH3P22223 829 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RYKP34925 604 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 KCNC4Q03721 635 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 IL18R1Q13478 541 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 BROXQ5VW32 411 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 LAIR2Q6ISS4 152 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF773Q6PK81 442 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 B3GNT6Q6ZMB0 384 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 Q7L0L9 218 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 KRT73Q86Y46 540 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 CSNK1A1LQ8N752 337 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 OR4K14Q8NGD5 310 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 OR5T3Q8NGG3 340 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 OR56A1Q8NGH5 318 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ALPK1Q96QP1 1244 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 RSPO3Q9BXY4 272 aaPredicted RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 QRSL1Q9H0R6 528 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 LIN28AQ9H9Z2 209 aaKnown RBP8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF556Q9HAH1 456 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 FANCEQ9HB96 536 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 KCMF1Q9P0J7 381 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 PHF11Q9UIL8 331 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 DAPP1Q9UN19 280 aa8.97□□□□□ -0.97
COL6A4P1-201ENST00000446690 TRIM64CA6NLI5 447 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 SLC1A7O00341 560 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 HCRTR1O43613 425 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 TPST2O60704 377 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 LDB3O75112 727 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 CCNB2O95067 398 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ANGPTL1O95841 491 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 RECKO95980 971 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 SMIM10L1P0DMW3 83 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ST6GAL1P15907 406 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF10P21506 573 aaPredicted RBP8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 CD27P26842 260 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 NUDT1P36639 197 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ANXA11P50995 505 aaKnown RBP8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 CRISP3P54108 245 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 KEAP1Q14145 624 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 RAB39AQ14964 217 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZBED5Q49AG3 693 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 FGD3Q5JSP0 725 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 BORAQ6PGQ7 559 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 TMEM64Q6YI46 380 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 LRRC25Q8N386 305 aaPredicted RBP8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF655Q8N720 491 aaPredicted RBP8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 OR4C15Q8NGM1 316 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ADAMTS16Q8TE57 1224 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 KLHL6Q8WZ60 621 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 THAP11Q96EK4 314 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 SMIM10Q96HG1 83 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF354BQ96LW1 612 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 WFDC6Q9BQY6 131 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 CXorf21Q9HAI6 301 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 FAM60AQ9NP50 221 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 GPR27Q9NS67 375 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 DDX18Q9NVP1 670 aaKnown RBP8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 NAALAD2Q9Y3Q0 740 aa8.96□□□□□ -0.97
COL6A4P1-201ENST00000446690 FAM221BA6H8Z2 402 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 FAM227AF5H4B4 570 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 SGK494L7N484 410 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 M0R3H8 397 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 TLR4O00206 839 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 FFAR1O14842 300 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 SDC3O75056 442 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 UBXN7O94888 489 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 CSF2P04141 144 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 CTSBP07858 339 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 CHRM4P08173 479 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 ANXA8P13928 327 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 KCNJ5P48544 419 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 TOP3AQ13472 1001 aaPredicted RBP8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 ELOCQ15369 112 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 SMN1Q16637 294 aaKnown RBP8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 GPR107Q5VW38 600 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 LACC1Q8IV20 430 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 OR4D11Q8NGI4 311 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 SFXN5Q8TD22 340 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 RASSF5Q8WWW0 418 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 MOAP1Q96BY2 351 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 C10orf90Q96M02 699 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 OR7D2Q96RA2 312 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 NMNAT1Q9HAN9 279 aaPredicted RBP8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 NDRG4Q9ULP0 352 aaKnown RBP8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 SNX5Q9Y5X3 404 aa8.96□□□□□ -0.98
COL6A4P1-201ENST00000446690 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 SLC9B1P1A6NJY1 282 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 ABCB7O75027 752 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 GASTP01350 101 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 IDH2P48735 452 aaKnown RBP8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 MAPK10P53779 464 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 GNA13Q14344 377 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 COLEC12Q5KU26 742 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 TCTN3Q6NUS6 607 aa8.95□□□□□ -0.98
COL6A4P1-201ENST00000446690 FAM111BQ6SJ93 734 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms