RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PARP8Q8N3A8 854 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 BBS5Q8N3I7 341 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 DCLK2Q8N568 766 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 TEX26Q8N6G2 289 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 ADAD2Q8NCV1 583 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF397Q8NF99 534 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PNPT1Q8TCS8 783 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 CD99L2Q8TCZ2 262 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 NT5C3BQ969T7 300 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 DHTKD1Q96HY7 919 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PIWIL1Q96J94 861 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 NEDD4LQ96PU5 975 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 ERGIC2Q96RQ1 377 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 KRT12Q99456 494 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 RBM24Q9BX46 236 aaKnown RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 LRRCC1Q9C099 1032 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 WWP1Q9H0M0 922 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 EGLN3Q9H6Z9 239 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF696Q9H7X3 374 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 AGPAT5Q9NUQ2 364 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 RNF14Q9UBS8 474 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 DBF4Q9UBU7 674 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 MIOXQ9UGB7 285 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PLCL2Q9UPR0 1127 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR10H1Q9Y4A9 318 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 MAGI1Q96QZ7 1491 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 PARD3Q8TEW0 1356 aa3.89□□□□□ -1.79
HMGB1P48-201ENST00000446155 SOGA1O94964 1423 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 SH3PXD2BA1X283 911 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 MFSD2BA6NFX1 497 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ASB14A6NK59 587 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF716A6NP11 495 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 PPIAL4DF5H284 164 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 BOLA2-SMG1P6H3BVE0 249 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 LINC01565O15544 149 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ECE2O60344 883 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 RHBDL1O75783 438 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 TM7SF2O76062 418 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 CLPTM1O96005 669 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 GOT2P00505 430 aaKnown RBP3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 SERPINA3P01011 423 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 NGFP01138 241 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 CHRNA1P02708 482 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ASGR1P07306 291 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF735P0CB33 412 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 CTNNA2P26232 953 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 OR1D5P58170 312 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 GNB1P62873 340 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 DRP2Q13474 957 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 EXT1Q16394 746 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 TATDN3Q17R31 274 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 LRIT3Q3SXY7 679 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 PDLIM3Q53GG5 364 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 FGD3Q5JSP0 725 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 SEL1L3Q68CR1 1132 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 METAP1DQ6UB28 335 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 CENPUQ71F23 418 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 VPS36Q86VN1 386 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 C17orf64Q86WR6 236 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 GPC2Q8N158 579 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ELMOD1Q8N336 334 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 OTUD6BQ8N6M0 293 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF383Q8NA42 475 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 CNBD1Q8NA66 436 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 MLKLQ8NB16 471 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 SLC37A3Q8NCC5 494 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 WDR36Q8NI36 951 aaKnown RBP3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ATP8B4Q8TF62 1192 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF274Q96GC6 653 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 HPDLQ96IR7 371 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 VSTM2LQ96N03 204 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 CASD1Q96PB1 797 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 TESK2Q96S53 571 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 LITAFQ99732 161 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 METTL7AQ9H8H3 244 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 GLRX2Q9NS18 164 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 ECHDC1Q9NTX5 307 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 FLRT3Q9NZU0 649 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 MDFICQ9P1T7 246 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 POLKQ9UBT6 870 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 RNF115Q9Y4L5 304 aa3.88□□□□□ -1.79
HMGB1P48-201ENST00000446155 PTPRUQ92729 1446 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 POLA1P09884 1462 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GRIN2BQ13224 1484 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 MAPKBP1O60336 1514 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ARID2Q68CP9 1835 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 A0A0U1RQS6 177 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 LRRIQ4A6NIV6 560 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 NPIPA2E9PIF3 369 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 P2RX6O15547 441 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ZNF208O43345 1280 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 MED7O43513 233 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 BUB1O43683 1085 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 BCAS1O75363 584 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ECI2O75521 394 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 KRT33AO76009 404 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 HPRP00739 348 aa3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 ANXA4P09525 319 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P48-201ENST00000446155 CCDC159P0C7I6 412 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms