RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SELENOSQ9BQE4 189 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TTYH2Q9BSA4 534 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 CNPY3Q9BT09 278 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ST6GALNAC5Q9BVH7 336 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TRMT61BQ9BVS5 477 aaKnown RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 NLNQ9BYT8 704 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PRRG4Q9BZD6 226 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 TRIM9Q9C026 710 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ILKAPQ9H0C8 392 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 FOXP1Q9H334 677 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 GOLPH3Q9H4A6 298 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ACTL8Q9H568 366 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ANKRA2Q9H9E1 313 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 POLD4Q9HCU8 107 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 LYRM4Q9HD34 91 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 GSN-AS1Q9NRJ2 163 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 MED17Q9NVC6 651 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 KLHL13Q9P2N7 655 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ASIC3Q9UHC3 531 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 GGA2Q9UJY4 613 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ADAM21Q9UKJ8 722 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 FBXO4Q9UKT5 387 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 ACSL5Q9ULC5 683 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 KLK4Q9Y5K2 254 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 PUS1Q9Y606 427 aaKnown RBP eCLIP3.42□□□□□ -1.86
SF3B1-205ENST00000424674 WNT6Q9Y6F9 365 aa3.42□□□□□ -1.86
SF3B1-205ENST00000424674 A0A1W2PPK0 400 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 WDR27A2RRH5 827 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RAB19A4D1S5 217 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 FRG2CA6NGY1 282 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 MANSC4A6NHS7 340 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 SERPINE3A8MV23 424 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 GOLGA8MH3BSY2 632 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 J3QR06 171 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ITGB1BP1O14713 200 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 NBR2O15453 112 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 GPAA1O43292 621 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 LDB3O75112 727 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF189O75820 626 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 NEBLO76041 1014 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RNF8O76064 485 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 NDUFB4O95168 129 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RETP07949 1114 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 IL6RP08887 468 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 TCN1P20061 433 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 GSTM3P21266 225 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PCMT1P22061 227 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 GNA11P29992 359 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 HOXA9P31269 272 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CASP14P31944 242 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CLDN15P56746 228 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 FKBP1BP68106 108 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CYP4F2P78329 520 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ZFP36L1Q07352 338 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 SRSF4Q08170 494 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CRYZQ08257 329 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CDH17Q12864 832 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PIGHQ14442 188 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 HEPACAMQ14CZ8 416 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 UAP1Q16222 522 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 EXT1Q16394 746 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PSG3Q16557 428 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 MICBQ29980 383 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 UGT3A2Q3SY77 523 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 FAM153CQ494X1 144 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 SYTL3Q4VX76 610 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 LGSNQ5TDP6 509 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 SUSD4Q5VX71 490 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 LIPKQ5VXJ0 399 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 TWF2Q6IBS0 349 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RGMBQ6NW40 437 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 H3F3CQ6NXT2 135 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 KCNIP4Q6PIL6 250 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 KIRREL2Q6UWL6 708 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 DHRS13Q6UX07 377 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PLXDC2Q6UX71 529 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF534Q76KX8 674 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CYP4Z1Q86W10 505 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CROCCP3Q8IVE0 287 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ITPRIPQ8IWB1 547 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 LRRC8AQ8IWT6 810 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 CHERPQ8IWX8 916 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 NELFCDQ8IXH7 590 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 GCSAMQ8N6F7 178 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 EMC1Q8N766 993 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 OR7G2Q8NG99 324 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 OR5AU1Q8NGC0 362 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 OR4A15Q8NGL6 344 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 RP9Q8TA86 221 aaKnown RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 SEMA4DQ92854 862 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ADIPOR1Q96A54 375 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ASB9Q96DX5 294 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 TM4SF19Q96DZ7 209 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF274Q96GC6 653 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PPP1R16AQ96I34 528 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 PLEKHA8Q96JA3 519 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 AKR1E2Q96JD6 320 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 TEKT3Q9BXF9 490 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 LRMDAQ9H2I8 198 aa3.41□□□□□ -1.86
SF3B1-205ENST00000424674 BICC1Q9H694 974 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms