RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MAGEA3P43357 314 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 ABHD17BQ5VST6 288 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 AFMIDQ63HM1 303 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 CDH24Q86UP0 819 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 AGBL5Q8NDL9 886 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 HDAC2Q92769 488 aaKnown RBP15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 TMEM165Q9HC07 324 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 TMEM138Q9NPI0 162 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 HSPE1-MOB4S4R3N1 261 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 H0YC42 278 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 GMFBP60983 142 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 PSPHP78330 225 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 ELOAQ14241 798 aaKnown RBP15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 ALKBH2Q6NS38 261 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 SLC25A24Q6NUK1 477 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 ZNF480Q8WV37 535 aa15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 CXXC1Q9P0U4 656 aaPredicted RBP15.97■□□□□ 0.15
PCDHA13-202ENST00000409494 SSNA1O43805 119 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 RETP07949 1114 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 PRKACGP22612 351 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 POU4F2Q12837 409 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 TRAM1Q15629 374 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 LCN8Q6JVE9 175 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 TM9SF4Q92544 642 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 SGTBQ96EQ0 304 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 KCTD7Q96MP8 289 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 CRB3Q9BUF7 120 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 PCDHB14Q9Y5E9 798 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 SOX1O00570 391 aaPredicted RBP15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 SDC3O75056 442 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 PRSS56P0CW18 603 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 MANEAQ5SRI9 462 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 LETMD1Q6P1Q0 360 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 TMEM107Q6UX40 140 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 PSD4Q8NDX1 1056 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 OR2T33Q8NG76 320 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 LRIT1Q9P2V4 623 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 VBP1P61758 197 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 VLDLRP98155 873 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 IL18Q14116 193 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 GPALPP1Q8IXQ4 340 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 SLC5A8Q8N695 610 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 PJA1Q8NG27 643 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 NEIL2Q969S2 332 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 POLDIP3Q9BY77 421 aaKnown RBP15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 ZNF222Q9UK12 451 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 SSC5DA1L4H1 1573 aa15.96■□□□□ 0.15
PCDHA13-202ENST00000409494 CASC3O15234 703 aaKnown RBP15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 MMP2P08253 660 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 TMBIM6P55061 237 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 SIM1P81133 766 aaPredicted RBP15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 MXD1Q05195 221 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 DEFB133Q30KQ1 61 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 CLEC12AQ5QGZ9 265 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 C11orf24Q96F05 449 aaPredicted RBP15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 UBXN10Q96LJ8 280 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 CENPMQ9NSP4 180 aa15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 ACSS1Q9NUB1 689 aaPredicted RBP15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 NXT1Q9UKK6 140 aaKnown RBP15.96■□□□□ 0.14
PCDHA13-202ENST00000409494 CCR5P51681 352 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 RAB39AQ14964 217 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 LARP4Q71RC2 724 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 NLRP8Q86W28 1048 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ITPAQ9BY32 194 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 CXCL16Q9H2A7 254 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 SEC61A2Q9H9S3 476 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 EMCNQ9ULC0 261 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 OR52A4PA6NMU1 304 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 RTCAO00442 366 aaKnown RBP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ANKRD28O15084 1053 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ICAM2P13598 275 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ZNF182P17025 639 aaPredicted RBP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TCEA1P23193 301 aaKnown RBP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 MS4A2Q01362 244 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 FIP1L1Q6UN15 594 aaKnown RBP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ZNF534Q76KX8 674 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ASB15Q8WXK1 588 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TUBA1CQ9BQE3 449 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TRIM8Q9BZR9 551 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 CRISPLD2Q9H0B8 497 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 H0YIV9 168 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 BLOC1S5-TXNDC5H3BN57 136 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ENTPD6O75354 484 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 RORCP51449 518 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 SMCO1Q147U7 214 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 OR8J1Q8NGP2 316 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ORAI3Q9BRQ5 295 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 ALOXE3Q9BYJ1 711 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TBC1D17Q9HA65 648 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 NPIPA2E9PIF3 369 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 NPIPA3F8WFD2 350 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 RNF13O43567 381 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 MT-ND5P03915 603 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 CHRM5P08912 532 aaPredicted RBP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TSFMP43897 325 aaKnown RBP15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TUBA1BP68363 451 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 KCNAB2Q13303 367 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 TUBA1AQ71U36 451 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 PPP1R3BQ86XI6 285 aa15.95■□□□□ 0.14
PCDHA13-202ENST00000409494 PGBD5Q8N414 524 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms