RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 BTN1A1Q13410 526 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 HSDL2Q6YN16 418 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC34A3Q8N130 599 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 CREB3L4Q8TEY5 395 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ST8SIA4Q92187 359 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC25A46Q96AG3 418 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 TMEM159Q96B96 161 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 PPCDCQ96CD2 204 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 GFM1Q96RP9 751 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 OR51B5Q9H339 312 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 HEXA-AS1Q9H8Q6 139 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 MGAT4AQ9UM21 535 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SH2B3Q9UQQ2 575 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 PPIL1Q9Y3C6 166 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF175Q9Y473 711 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 ENPP4Q9Y6X5 453 aa15.16■□□□□ 0.02
CHMP1A-201ENST00000397901 SH3D21A4FU49 640 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 OR5K4A6NMS3 321 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 KELP23276 732 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 ITGB7P26010 798 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 TLE2Q04725 743 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 EEF1A2Q05639 463 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 PRSS53Q2L4Q9 553 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 MPPE1Q53F39 396 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 RPS26P11Q5JNZ5 115 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 DDI2Q5TDH0 399 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 MED27Q6P2C8 311 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 TRIM40Q6P9F5 258 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 MMP21Q8N119 569 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 OXR1Q8N573 874 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 FIBINQ8TAL6 211 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 KLHL15Q96M94 604 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 SORCS2Q96PQ0 1159 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 SMG9Q9H0W8 520 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CCDC88CQ9P219 2028 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 STUB1Q9UNE7 303 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 ARPC4-TTLL3A0A0A6YYG9 625 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 TRBV4-1A0A0J9YWV2 114 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 LYRM1O43325 122 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CATP04040 527 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC2A2P11168 524 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 HLA-FP30511 346 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CRYBB2P43320 205 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 MAN2A2P49641 1150 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CLCNKAP51800 687 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 ABATP80404 500 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 MEF2AQ02078 507 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 MXD1Q05195 221 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 RBBP4Q09028 425 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 ZMYND11Q15326 602 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 ZDHHC20Q5W0Z9 365 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CNKSR3Q6P9H4 555 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 LIPIQ6XZB0 460 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 WDR53Q7Z5U6 358 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 BCDIN3DQ7Z5W3 292 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 RASGRP3Q8IV61 690 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 TIGD4Q8IY51 512 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CLDN22Q8N7P3 220 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 GOT1L1Q8NHS2 421 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 HERVK_113Q902F9 699 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 ZBED6CLQ96FA7 236 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 WRAP53Q9BUR4 548 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 RIOK2Q9BVS4 552 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 TMEM38AQ9H6F2 299 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 CUEDC1Q9NWM3 386 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 PTTG3PQ9NZH4 202 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 UBQLN2Q9UHD9 624 aa15.15■□□□□ 0.02
CHMP1A-201ENST00000397901 TLR4O00206 839 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 CSO75390 466 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 RECKO95980 971 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 IFNW1P05000 195 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 FURINP09958 794 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 GJA1P17302 382 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 PDHA2P29803 388 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 TPMTP51580 245 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 EPHB3P54753 998 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 TAS2R50P59544 299 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 RAB14P61106 215 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 RPS26P62854 115 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 RAB33AQ14088 237 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 SLCO4C1Q6ZQN7 724 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 METTL3Q86U44 580 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 FAM46DQ8NEK8 389 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 OR52H1Q8NGJ2 320 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 ZNF689Q96CS4 500 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 IL21Q9HBE4 155 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 IFT46Q9NQC8 304 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 PHF11Q9UIL8 331 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 SSR3Q9UNL2 185 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 PCDHGB7Q9Y5F8 929 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 HELZP42694 1942 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 MYOFQ9NZM1 2061 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 HYKKA2RU49 373 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 A8MVJ9 347 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 GPR37L1O60883 481 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 IL1AP01583 271 aa15.14■□□□□ 0.01
CHMP1A-201ENST00000397901 ZP3P21754 424 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms