RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 GOT2P00505 430 aaKnown RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 NKX3-2P78367 333 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ATP6AP1Q15904 470 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 TMEM156Q8N614 296 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ADAMTS19Q8TE59 1207 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ELP4Q96EB1 424 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 USP32Q8NFA0 1604 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 FSCN2O14926 492 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 PRSS3P35030 304 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 ZMAT1Q5H9K5 638 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 TSSK4Q6SA08 328 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 OR6N2Q8NGY6 317 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 FOXRED1Q96CU9 486 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 CTPS2Q9NRF8 586 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ZFR2Q9UPR6 939 aaKnown RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 K7EQM0 130 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 GJB1P08034 283 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 EDNRBP24530 442 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 NDST2P52849 883 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 MEP1AQ16819 746 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ATPAF1Q5TC12 328 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 LYRM7Q5U5X0 104 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SETD7Q8WTS6 366 aaKnown RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 SLC29A3Q9BZD2 475 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 AKAIN1P0CW23 69 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ZNF92Q03936 586 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 PIGZQ86VD9 579 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SPRYD4Q8WW59 207 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 GTF2H4Q92759 462 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 C2orf42Q9NWW7 574 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CLTCL1P53675 1640 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 A0A1W2PPW3 197 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 ANKUB1A6NFN9 424 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 KCNK2O95069 426 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 YBEYP58557 167 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 FOXK1P85037 733 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 TMEM236Q5W0B7 351 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SLC35F3Q8IY50 421 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 TMEM151AQ8N4L1 468 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 AGBL3Q8NEM8 1001 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SPTSSAQ969W0 71 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SGCZQ96LD1 299 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 TESQ9UGI8 421 aaKnown RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 SPHARQ15513 63 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SULF2Q8IWU5 870 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 PHOSPHO1Q8TCT1 267 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 PDCD1LG2Q9BQ51 273 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SPATA31A6Q5VVP1 1343 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CD8B2A6NJW9 211 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CD8BP10966 210 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 HK3P52790 923 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 NKX2-5P52952 324 aaPredicted RBP12.87□□□□□ -0.35
USP49-203ENST00000394253 SOHLH1Q5JUK2 328 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 HACD4Q5VWC8 232 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 GPC2Q8N158 579 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CERKQ8TCT0 537 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 SPATC1LQ9H0A9 340 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 CHRNA9Q9UGM1 479 aa12.87□□□□□ -0.35
USP49-203ENST00000394253 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 INHAP05111 366 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 DBX2Q6ZNG2 339 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 LIX1LQ8IVB5 337 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 OR13J1Q8NGT2 312 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 OR14C36Q8NHC7 312 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 M1APQ8TC57 530 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 SLC2A12Q8TD20 617 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 CORO2AQ92828 525 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 ADIPOR1Q96A54 375 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 A0A1W2PQL4 384 aaPredicted RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 PEX12O00623 359 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 FAM189A1O60320 539 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 NFATC1O95644 943 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 PGAM5Q96HS1 289 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 PKP2Q99959 881 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 AIG1Q9NVV5 245 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 RAP2BP61225 183 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 MPPED2Q15777 294 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 TSSK2Q96PF2 358 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 AKTIPQ9H8T0 292 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 POU2F3Q9UKI9 436 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 DERAQ9Y315 318 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 GNSP15586 552 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms