RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MAPK11Q15759 364 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 SYPL1Q16563 259 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 PRAMEF8Q5VWM4 474 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 PRAMEF7Q5VXH5 474 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 TCTN3Q6NUS6 607 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 ASPGQ86U10 573 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 ZFPM2Q8WW38 1151 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 DNASE1L2Q92874 299 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 GTPBP3Q969Y2 492 aaKnown RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 CNRIP1Q96F85 164 aaPredicted RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 BTBD2Q9BX70 525 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 SERHL2Q9H4I8 314 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 APOBEC3BQ9UH17 382 aaKnown RBP11.91□□□□□ -0.5
VPS16-202ENST00000380445 PSORS1C1Q9UIG5 152 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 MYO9BQ13459 2157 aa11.91□□□□□ -0.5
VPS16-202ENST00000380445 FAAHO00519 579 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 EMC8O43402 210 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 GASTP01350 101 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 NDUFV2P19404 249 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CTSKP43235 329 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 PRKAG1P54619 331 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 SRP54P61011 504 aaKnown RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 CD300CQ08708 224 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CTF1Q16619 201 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 Q6ZPB1 254 aaPredicted RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 P2RY8Q86VZ1 359 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 NRROSQ86YC3 692 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CCDC116Q8IYX3 515 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 SAMD14Q8IZD0 417 aaPredicted RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 RPLP0P6Q8NHW5 317 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 NT5CQ8TCD5 201 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 TANKQ92844 425 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 MSLNLQ96KJ4 702 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 SIGLEC11Q96RL6 698 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 RHCGQ9UBD6 479 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CES1P1Q9UKY3 287 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 DUSP12Q9UNI6 340 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 PRELID1Q9Y255 219 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 HS3ST3A1Q9Y663 406 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 A0A0G2JPF8 293 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 HNRNPCL2B2RXH8 293 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 HNRNPCL3B7ZW38 293 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 C4orf51C9J302 202 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 FAM47E-STBD1D6RA91 191 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 H0Y8X5 98 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 FFAR1O14842 300 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 AXIN1O15169 862 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 EML2O95834 649 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 INHBBP09529 407 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 HNRNPCL4P0DMR1 293 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 POU2F1P14859 743 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 BUD31P41223 144 aaPredicted RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 SLC19A1P41440 591 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 GSSP48637 474 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CRISP1P54107 249 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 BTN3A2P78410 334 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 PTGES3Q15185 160 aaKnown RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 CEBPEQ15744 281 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 ZNF770Q6IQ21 691 aaPredicted RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 DEF8Q6ZN54 512 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 DNAJC22Q8N4W6 341 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 LINC00471Q8N535 108 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 OR5D16Q8NGK9 328 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 SUN3Q8TAQ9 357 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 JPH3Q8WXH2 748 aaPredicted RBP11.9□□□□□ -0.5
VPS16-202ENST00000380445 TMEM168Q9H0V1 697 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 ACAD8Q9UKU7 415 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 CARD8Q9Y2G2 431 aa11.9□□□□□ -0.5
VPS16-202ENST00000380445 SH3D21A4FU49 640 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 BTN3A3O00478 584 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 TNRC18O15417 2968 aaPredicted RBP11.9□□□□□ -0.51
VPS16-202ENST00000380445 PRKRAO75569 313 aaKnown RBP11.9□□□□□ -0.51
VPS16-202ENST00000380445 HMGN2P05204 90 aaKnown RBP11.9□□□□□ -0.51
VPS16-202ENST00000380445 CD72P21854 359 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 MASP1P48740 699 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 PCYT1AP49585 367 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 ILF3Q12906 894 aaKnown RBP eCLIP11.9□□□□□ -0.51
VPS16-202ENST00000380445 AQP6Q13520 282 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 LASP1Q14847 261 aaKnown RBP11.9□□□□□ -0.51
VPS16-202ENST00000380445 SUZ12Q15022 739 aaKnown RBP11.9□□□□□ -0.51
VPS16-202ENST00000380445 C18orf63Q68DL7 685 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 KLHL17Q6TDP4 642 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 TRIM48Q8IWZ4 208 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 SMRP1Q8NCR6 262 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 YIPF6Q96EC8 236 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 CALML5Q9NZT1 146 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 ANKMY1Q9P2S6 941 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 PHF11Q9UIL8 331 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 CA5BQ9Y2D0 317 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.51
VPS16-202ENST00000380445 TCRBV21S2A2A0A5A6 115 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 CASC3O15234 703 aaKnown RBP11.89□□□□□ -0.51
VPS16-202ENST00000380445 TNFSF14O43557 240 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 ASNA1O43681 348 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 UGT2B17O75795 530 aa11.89□□□□□ -0.51
VPS16-202ENST00000380445 NR2F6P10588 404 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms