RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 NDRG4Q9ULP0 352 aaKnown RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 CKAP5Q14008 2032 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 PPM1DO15297 605 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 FPR1P21462 350 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 MVDP53602 400 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 CDH12P55289 794 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SCN1BQ07699 218 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 HNRNPA1L2Q32P51 320 aaKnown RBP13.16□□□□□ -0.3
SF1-202ENST00000334944 RFX4Q33E94 735 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SPIN4Q56A73 249 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 GPR155Q7Z3F1 870 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 COMMD7Q86VX2 200 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 LHFPL5Q8TAF8 219 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 C16orf78Q8WTQ4 265 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 OR8D1Q8WZ84 308 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 C7orf34Q96L11 122 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 FEVQ99581 238 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 ASPNQ9BXN1 380 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 ZDHHC5Q9C0B5 715 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 KCNN2Q9H2S1 579 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 REEP4Q9H6H4 257 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 TRIM45Q9H8W5 580 aaPredicted RBP13.16□□□□□ -0.3
SF1-202ENST00000334944 BRF2Q9HAW0 419 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SNX11Q9Y5W9 270 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 QSOX1O00391 747 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SLC22A5O76082 557 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 ASMTP46597 345 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 PNLIPRP1P54315 467 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 UAP1L1Q3KQV9 507 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 KIAA1614Q5VZ46 1190 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SZRD1Q7Z422 152 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 PHF21AQ96BD5 680 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 F2RL3Q96RI0 385 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 NPIPB8E9PQR5 432 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 LINC01387J3KSC0 135 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 PRMT3O60678 531 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 PCDH8O95206 1070 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 CSF3P09919 207 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SSTR2P30874 369 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 SOX3P41225 446 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 CXCR4P61073 352 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 GPR68Q15743 365 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 GPR19Q15760 415 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 IQCCQ4KMZ1 466 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 ZNF658BQ4V348 819 aaPredicted RBP13.16□□□□□ -0.3
SF1-202ENST00000334944 PYDC2Q56P42 97 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 RPS26P11Q5JNZ5 115 aaPredicted RBP13.16□□□□□ -0.3
SF1-202ENST00000334944 CLVS2Q5SYC1 327 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 TNFAIP8L2Q6P589 184 aaPredicted RBP13.16□□□□□ -0.3
SF1-202ENST00000334944 PLET1Q6UQ28 207 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 OLIG3Q7RTU3 272 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 FAM124AQ86V42 546 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 C11orf65Q8NCR3 313 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 UTP15Q8TED0 518 aaKnown RBP13.16□□□□□ -0.3
SF1-202ENST00000334944 SIGLEC11Q96RL6 698 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 OSGEPL1Q9H4B0 414 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 WASH6PQ9NQA3 447 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 RAB23Q9ULC3 237 aa13.16□□□□□ -0.3
SF1-202ENST00000334944 A0A0C4DFX4 3053 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 H7BY64 318 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PLA2G10O15496 165 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 SEMG1P04279 462 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 SRPRAP08240 638 aaKnown RBP13.15□□□□□ -0.3
SF1-202ENST00000334944 FURINP09958 794 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 ITGB7P26010 798 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 GPC1P35052 558 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 P2RY2P41231 377 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 RPS5P46782 204 aaKnown RBP13.15□□□□□ -0.3
SF1-202ENST00000334944 NPRL3Q12980 569 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
SF1-202ENST00000334944 GAB4Q2WGN9 574 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 TOR1AIP1Q5JTV8 583 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 NXPE4Q6UWF7 544 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 CREB3L2Q70SY1 520 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 ETFBKMTQ8IXQ9 262 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 SLC5A8Q8N695 610 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 OR9Q2Q8NGE9 314 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PRAP1Q96NZ9 151 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 XKR8Q9H6D3 395 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 MIEF1Q9NQG6 463 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 B3GNT2Q9NY97 397 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 NDUFAF4Q9P032 175 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PCDHGA6Q9Y5G7 932 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 PAPLNO95428 1278 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 ALAS2P22557 587 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 DSTNP60981 165 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 SPIBQ01892 262 aa13.15□□□□□ -0.3
SF1-202ENST00000334944 EIF2B5Q13144 721 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms