RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FLNAP21333 2647 aaKnown RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 A0A0A6YYD5 115 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 IQANK1A0A1B0GTG1 560 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 EXOC1LA0A1B0GW35 172 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 HMX2A2RU54 273 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 POC1B-GALNT4F8VUJ3 575 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 UBXN8O00124 270 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 KLHL2O95198 593 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 HPNP05981 417 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 MTHFD2P13995 350 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 FOSL1P15407 271 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 DNASE1P24855 282 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 UQCRC1P31930 480 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 BSGP35613 385 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 BUD31P41223 144 aaPredicted RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 IRF9Q00978 393 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 DUSP8Q13202 625 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 ZNF267Q14586 743 aaPredicted RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 ACAP2Q15057 778 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 NHSL2Q5HYW2 709 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 CAMKMTQ7Z624 323 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 CDC20BQ86Y33 519 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 LACC1Q8IV20 430 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 LIX1Q8N485 282 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 RNF175Q8N4F7 328 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 FAM13CQ8NE31 585 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 TNIP2Q8NFZ5 429 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 RIT1Q92963 219 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 TP53INP1Q96A56 240 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 LRRC46Q96FV0 321 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 ZNF597Q96LX8 424 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 SECISBP2Q96T21 854 aaKnown RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 TIMP4Q99727 224 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 DOHHQ9BU89 302 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 VPS11Q9H270 941 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 DDX31Q9H8H2 851 aaKnown RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 PRM3Q9NNZ6 103 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 LYARQ9NX58 379 aaKnown RBP13.04□□□□□ -0.32
RPP40-201ENST00000319533 RAB21Q9UL25 225 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 ABCA2Q9BZC7 2435 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 DNHD1Q96M86 4753 aa13.04□□□□□ -0.32
RPP40-201ENST00000319533 FREM3P0C091 2139 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 A0A1W2PR48 441 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 WASHC1A8K0Z3 465 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 H0YIV9 168 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 PRKRAO75569 313 aaKnown RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 SNX4O95219 450 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 ABHD2P08910 425 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 SLC35E2P0CK97 266 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 GFAPP14136 432 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 EPB42P16452 691 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 BMP5P22003 454 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 PTX3P26022 381 aaPredicted RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 TRPC1P48995 793 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 RAP1GDS1P52306 607 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 ZNF136P52737 540 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 PPP2R2AP63151 447 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 CUL3Q13618 768 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 CEBPEQ15744 281 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 LGSNQ5TDP6 509 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 FNDC7Q5VTL7 733 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 LIPJQ5W064 366 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 NSUN5P2Q63ZY6 315 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 TMEM198Q66K66 360 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 VASNQ6EMK4 673 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 WDR93Q6P2C0 686 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 PM20D2Q8IYS1 436 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 CENPLQ8N0S6 344 aaPredicted RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 TAGAPQ8N103 731 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 UHMK1Q8TAS1 419 aaKnown RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 GAL3ST4Q96RP7 486 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 CENPKQ9BS16 269 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 ANGPTL4Q9BY76 406 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 ZNF180Q9UJW8 692 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 PLEKHA6Q9Y2H5 1048 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 RPH3AQ9Y2J0 694 aaPredicted RBP13.03□□□□□ -0.32
RPP40-201ENST00000319533 ANGPTL3Q9Y5C1 460 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 PCDHGA11Q9Y5H2 935 aa13.03□□□□□ -0.32
RPP40-201ENST00000319533 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 CAPN14A8MX76 684 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 TP53I11O14683 189 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 TMPRSS11DO60235 418 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 OR10H2O60403 315 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 UGDHO60701 494 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 EEDO75530 441 aaKnown RBP13.02□□□□□ -0.33
RPP40-201ENST00000319533 GDF1P27539 372 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 RPS13P62277 151 aaKnown RBP13.02□□□□□ -0.33
RPP40-201ENST00000319533 FUT7Q11130 342 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 DDX39BQ13838 428 aaKnown RBP13.02□□□□□ -0.33
RPP40-201ENST00000319533 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
RPP40-201ENST00000319533 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.33
RPP40-201ENST00000319533 PAMR1Q6UXH9 720 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms