RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 A8MU76 341 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 TFAP2AP05549 437 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 CDK4P11802 303 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 ARSAP15289 507 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 MAD2L1BPQ15013 274 aaPredicted RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 MLIPQ5VWP3 458 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 GKN2Q86XP6 184 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 ASCC1Q8N9N2 400 aaKnown RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 GATSQ8NAP1 163 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 HCAR2Q8TDS4 363 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 E2F3O00716 465 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 RLN2P04090 185 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 ALKBH2Q6NS38 261 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 HSD11B1LQ7Z5J1 315 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 GPR149Q86SP6 731 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 LILRA2Q8N149 483 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 LNX2Q8N448 690 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 IQCF1Q8N6M8 205 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 OR5AR1Q8NGP9 310 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 OR56A3Q8NH54 315 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 KLRF1Q9NZS2 232 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 OR1A2Q9Y585 309 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 A0A1W2PPK0 400 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 FUOMA2VDF0 154 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PLD2O14939 933 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 KDM4BO94953 1096 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PFKLP17858 780 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 VAMP1P23763 118 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 CD97P48960 835 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 RPA4Q13156 261 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 CST6Q15828 149 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 MPP7Q5T2T1 576 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PNCKQ6P2M8 343 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 TAS1R1Q7RTX1 841 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 OR5T3Q8NGG3 340 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PELI2Q9HAT8 420 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 DMRT3Q9NQL9 472 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 ACVR1BP36896 505 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 EIF1AXP47813 144 aaKnown RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 NNATQ16517 81 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 NADSYN1Q6IA69 706 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 ZNF615Q8N8J6 731 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 DOK4Q8TEW6 326 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 ISG20Q96AZ6 181 aaKnown RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 SLC2A4RGQ9NR83 387 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PPM1BO75688 479 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PTTG1O95997 202 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 CD40LGP29965 261 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 LCN1P31025 176 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 EIF5AP63241 154 aaKnown RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 NTHL1P78549 312 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 CHDHQ8NE62 594 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 TESCQ96BS2 214 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 ABCG5Q9H222 651 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 HMX2A2RU54 273 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 EIF1AYO14602 144 aaKnown RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 MUSKO15146 869 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PRKYO43930 277 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 AK1P00568 194 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 PLCZ1Q86YW0 608 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 IQCF2Q8IXL9 164 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 PGBD5Q8N414 524 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 METTL27Q8N6F8 245 aaPredicted RBP13.11□□□□□ -0.31
SPAST-201ENST00000315285 TMEM184CQ9NVA4 438 aa13.11□□□□□ -0.31
SPAST-201ENST00000315285 GABRR3A8MPY1 467 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 MTRF1O75570 445 aaKnown RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
SPAST-201ENST00000315285 SELPLGQ14242 412 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 FIGNL1Q6PIW4 674 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 XKRXQ6PP77 449 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 ISL2Q96A47 359 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 IL21RQ9HBE5 538 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 NUDT15Q9NV35 164 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 M0R3H8 397 aa13.1□□□□□ -0.31
SPAST-201ENST00000315285 RNF13O43567 381 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms