RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PRAMEF10O60809 474 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GCAP28676 217 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SLC15A1P46059 708 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 MS4A2Q01362 244 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CLCA4Q14CN2 919 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 PTPRRQ15256 657 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 RGNQ15493 299 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 RPL13AP3Q6NVV1 102 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 LARP4Q71RC2 724 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 DTWD1Q8N5C7 304 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SGTBQ96EQ0 304 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 PDLIM5Q96HC4 596 aaKnown RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ORAI3Q9BRQ5 295 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ACTRT3Q9BYD9 372 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 MCOLN1Q9GZU1 580 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SEC14L4Q9UDX3 406 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 PCDHGA7Q9Y5G6 932 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 DDX60Q8IY21 1712 aaKnown RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 A0A0G2JPF8 293 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SMIM30A4D0T7 59 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 MROH6A6NGR9 719 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 HNRNPCL3B7ZW38 293 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 POLR1CO15160 346 aaPredicted RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GATBO75879 557 aaKnown RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 C1SP09871 688 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 HNRNPCL4P0DMR1 293 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GABRB3P28472 473 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SGSHP51688 502 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ARHGDIBP52566 201 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 VBP1P61758 197 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 MRPS21P82921 87 aaKnown RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ACY1Q03154 408 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GBX1Q14549 363 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 KCTD18Q6PI47 426 aaPredicted RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ACOT4Q8N9L9 421 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CST11Q9H112 138 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 TMEM45AQ9NWC5 275 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ASB6Q9NWX5 421 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 A0A1B0GVI7 797 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 METTL21EPA6NDL7 271 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CCRL2O00421 344 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 PSKH1P11801 424 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 NDUFV2P19404 249 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ITIH1P19827 911 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CCNOP22674 350 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 NUDT1P36639 197 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SERTAD2Q14140 314 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CTSL3PQ5NE16 218 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 C1orf94Q6P1W5 598 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 XKR5Q6UX68 686 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ASRGL1Q7L266 308 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ANKRD33Q7Z3H0 272 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GPALPP1Q8IXQ4 340 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ANKFN1Q8N957 763 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 PSD4Q8NDX1 1056 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 C3orf30Q96M34 536 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SERINC2Q96SA4 455 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SLC35F4A4IF30 521 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 FARS2O95363 451 aaKnown RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ITGA5P08648 1049 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SPARCP09486 303 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 CKMT1AP12532 417 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GPX3P22352 226 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GADD45AP24522 165 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 DCKP27707 260 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 DCDC1P59894 354 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 AKIRIN2Q53H80 203 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 LHFPL3Q86UP9 236 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 MFSD2AQ8NA29 543 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SLC22A8Q8TCC7 542 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 MACROD1Q9BQ69 325 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 TIMM29Q9BSF4 260 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 ZNF717Q9BY31 904 aaPredicted RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 SRA1Q9HD15 236 aaKnown RBP10.72□□□□□ -0.69
USP6NL-201ENST00000277575 FANCFQ9NPI8 374 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 NUMBLQ9Y6R0 609 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 EVPLQ92817 2033 aa10.72□□□□□ -0.69
USP6NL-201ENST00000277575 GXYLT2A0PJZ3 443 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 J3QRK9 145 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 C1orf105O95561 183 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 OXSR1O95747 527 aaPredicted RBP10.71□□□□□ -0.69
USP6NL-201ENST00000277575 IL33O95760 270 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 T-ENOLP0DO92 83 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 HMGA1P17096 107 aaKnown RBP10.71□□□□□ -0.69
USP6NL-201ENST00000277575 TNFRSF1BP20333 461 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 MAPK3P27361 379 aaPredicted RBP10.71□□□□□ -0.69
USP6NL-201ENST00000277575 SOX2P48431 317 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 ALG10BQ5I7T1 473 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 RFLNAQ6ZTI6 216 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 ZNF440Q8IYI8 595 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 NETO1Q8TDF5 533 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 CREB3L4Q8TEY5 395 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 TAMM41Q96BW9 452 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 EGLN2Q96KS0 407 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 LRR1Q96L50 414 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 UBXN10Q96LJ8 280 aa10.71□□□□□ -0.69
USP6NL-201ENST00000277575 ALOXE3Q9BYJ1 711 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms