RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SNX5Q9Y5X3 404 aa21.9■■□□□ 1.1
MSX2-201ENST00000239243 KRBA1A5PL33 1030 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 AGXTP21549 392 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 XKP51811 444 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 RACK1P63244 317 aaKnown RBP21.89■■□□□ 1.09
MSX2-201ENST00000239243 PMS2P3Q13401 168 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 LAIR2Q6ISS4 152 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 CSNK1A1LQ8N752 337 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 ZFAND2BQ8WV99 257 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 CCDC3Q9BQI4 270 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 CXorf21Q9HAI6 301 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 SCN3BQ9NY72 215 aa21.89■■□□□ 1.09
MSX2-201ENST00000239243 SMIM11AP58511 58 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 GANABQ14697 944 aaKnown RBP21.88■■□□□ 1.09
MSX2-201ENST00000239243 RAB39AQ14964 217 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 USP53Q70EK8 1073 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 BPIFB6Q8NFQ5 453 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 ZNF420Q8TAQ5 688 aaPredicted RBP21.88■■□□□ 1.09
MSX2-201ENST00000239243 CNIH3Q8TBE1 160 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 ALPK1Q96QP1 1244 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 ACTRT3Q9BYD9 372 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 NTMQ9P121 344 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 A0A1W2PR77 199 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 A0A1W2PS29 197 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 DUXAA6NLW8 204 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 ENO4A6NNW6 628 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 AGR2O95994 175 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 FASLGP48023 281 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 NEDD8Q15843 81 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 ATAD3BQ5T9A4 648 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 ZNF761Q86XN6 746 aaPredicted RBP21.88■■□□□ 1.09
MSX2-201ENST00000239243 CLVS1Q8IUQ0 354 aaPredicted RBP21.88■■□□□ 1.09
MSX2-201ENST00000239243 OR7D2Q96RA2 312 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 YIPF4Q9BSR8 244 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 FOXQ1Q9C009 403 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 TMCC3Q9ULS5 477 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 DOLKQ9UPQ8 538 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 SLC9A8Q9Y2E8 581 aa21.88■■□□□ 1.09
MSX2-201ENST00000239243 EYSQ5T1H1 3165 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 CASC3O15234 703 aaKnown RBP21.87■■□□□ 1.09
MSX2-201ENST00000239243 WNT1P04628 370 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 PTGER1P34995 402 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 LSAMPQ13449 338 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 MAD2L1BPQ15013 274 aaPredicted RBP21.87■■□□□ 1.09
MSX2-201ENST00000239243 PROX2Q3B8N5 592 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 GPAT3Q53EU6 434 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 MS4A4EQ96PG1 132 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 UCK1Q9HA47 277 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 TLR4O00206 839 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 TYRP1P17643 537 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 TUBA3CQ13748 450 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 PUS10Q3MIT2 529 aaKnown RBP21.87■■□□□ 1.09
MSX2-201ENST00000239243 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.87■■□□□ 1.09
MSX2-201ENST00000239243 FAM92BQ6ZTR7 304 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 SPARTQ8N0X7 666 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 PARP8Q8N3A8 854 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 NODALQ96S42 347 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 CSF3RQ99062 836 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.87■■□□□ 1.09
MSX2-201ENST00000239243 PTGFRNQ9P2B2 879 aa21.87■■□□□ 1.09
MSX2-201ENST00000239243 PCDH17O14917 1159 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 OXSR1O95747 527 aaPredicted RBP21.86■■□□□ 1.09
MSX2-201ENST00000239243 CHRM4P08173 479 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 EPHA2P29317 976 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 CSNK2BP67870 215 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 TCTN3Q6NUS6 607 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 GPR153Q6NV75 609 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 C16orf58Q96GQ5 468 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 DHRS1Q96LJ7 313 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 NAALAD2Q9Y3Q0 740 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 CCDC88CQ9P219 2028 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 GALR3O60755 368 aaPredicted RBP21.86■■□□□ 1.09
MSX2-201ENST00000239243 UBXN7O94888 489 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 IL9P15248 144 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 CDH3P22223 829 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 MAN2A2P49641 1150 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 SNRPNP63162 240 aaKnown RBP21.86■■□□□ 1.09
MSX2-201ENST00000239243 SIM1P81133 766 aaPredicted RBP21.86■■□□□ 1.09
MSX2-201ENST00000239243 FUT5Q11128 374 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 LTB4RQ15722 352 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 B3GNT8Q7Z7M8 397 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 CAMKK1Q8N5S9 505 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 DEFB119Q8N690 84 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 KAT2AQ92830 837 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 TRNT1Q96Q11 434 aaKnown RBP21.86■■□□□ 1.09
MSX2-201ENST00000239243 NMNAT1Q9HAN9 279 aaPredicted RBP21.86■■□□□ 1.09
MSX2-201ENST00000239243 FANCEQ9HB96 536 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 RLIMQ9NVW2 624 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 ACAD8Q9UKU7 415 aa21.86■■□□□ 1.09
MSX2-201ENST00000239243 SCN3AQ9NY46 2000 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 FFAR1O14842 300 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 TNRC18O15417 2968 aaPredicted RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 MRPS14O60783 128 aaKnown RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 SLITRK5O94991 958 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 CPMP14384 443 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 PORP16435 677 aaPredicted RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 CBLP22681 906 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 GGT2P36268 569 aa21.85■■□□□ 1.09
MSX2-201ENST00000239243 VSX2P58304 361 aaPredicted RBP21.85■■□□□ 1.09
MSX2-201ENST00000239243 RPL6Q02878 288 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms