RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CDK15Q96Q40 435 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 PELOQ9BRX2 385 aaKnown RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 WWTR1Q9GZV5 400 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 VPS11Q9H270 941 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 DDX31Q9H8H2 851 aaKnown RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 PROK2Q9HC23 129 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 ZNF358Q9NW07 568 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SPRR3Q9UBC9 169 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 CHCHD2Q9Y6H1 151 aaPredicted RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 MED13LQ71F56 2210 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 TRGV5A0A0B4J1U4 118 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 A0A0G2JNJ9 132 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 A0A1W2PS29 197 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 CCDC189A1A4V9 331 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 FOXO6A8MYZ6 492 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 HCN1O60741 890 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 AIFM1O95831 613 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 ALDOAP04075 364 aaKnown RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 CLPSP04118 112 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 FBXO45P0C2W1 286 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 EBPQ15125 230 aaKnown RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 C1orf185Q5T7R7 199 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 WLSQ5T9L3 541 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 TRABD2AQ86V40 505 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 NUDT13Q86X67 352 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 DCAKDQ8WVC6 231 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 SLC44A1Q8WWI5 657 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 RIT1Q92963 219 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 PHF21BQ96EK2 531 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 JSRP1Q96MG2 331 aaPredicted RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 PAFAH2Q99487 392 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 ZNF703Q9H7S9 590 aaPredicted RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 NOL11Q9H8H0 719 aaKnown RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 WDR41Q9HAD4 459 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 ZFP64Q9NPA5 681 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 ALKBH4Q9NXW9 302 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 SENP1Q9P0U3 644 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 Q9UFV3 132 aa13.8□□□□□ -0.2
UPK3A-201ENST00000216211 BOKQ9UMX3 212 aaPredicted RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 TNPO3Q9Y5L0 923 aaKnown RBP13.8□□□□□ -0.2
UPK3A-201ENST00000216211 LRRC3CA6NJW4 275 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 FOXE1O00358 373 aaPredicted RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 OR7A17O14581 309 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 PGRMC2O15173 223 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 WDR1O75083 606 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 CLDN9O95484 217 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 HOXD4P09016 255 aaPredicted RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 SERPINB3P29508 390 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 SSTR4P31391 388 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 ADH7P40394 386 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 ZFP36L2P47974 494 aaKnown RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 CCNG1P51959 295 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 GNGT1P63211 74 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 TBL3Q12788 808 aaKnown RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 TMEM64Q6YI46 380 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 LIX1LQ8IVB5 337 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 DND1Q8IYX4 353 aaKnown RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 CNPY4Q8N129 248 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 PTGR2Q8N8N7 351 aaPredicted RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 OR52B6Q8NGF0 335 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 SLC6A15Q9H2J7 730 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 TEX10Q9NXF1 929 aaPredicted RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 CNIH4Q9P003 139 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 TBK1Q9UHD2 729 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 ZNF180Q9UJW8 692 aa13.79□□□□□ -0.2
UPK3A-201ENST00000216211 CNOT11Q9UKZ1 510 aaKnown RBP13.79□□□□□ -0.2
UPK3A-201ENST00000216211 OR6C76A6NM76 312 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 CT62P0C5K7 136 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 GALNSP34059 522 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 TRPC1P48995 793 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 SLC18A1P54219 525 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 TESK1Q15569 626 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 NTRK2Q16620 822 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 OR52E8Q6IFG1 317 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 LRRC25Q8N386 305 aaPredicted RBP13.78□□□□□ -0.2
UPK3A-201ENST00000216211 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 MZB1Q8WU39 189 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 NSUN5Q96P11 429 aaKnown RBP13.78□□□□□ -0.2
UPK3A-201ENST00000216211 SERPINI1Q99574 410 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 ZNF559Q9BR84 538 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 DOHHQ9BU89 302 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 SSU72Q9NP77 194 aaKnown RBP13.78□□□□□ -0.2
UPK3A-201ENST00000216211 KIAA1549Q9HCM3 1950 aa13.78□□□□□ -0.2
UPK3A-201ENST00000216211 C2orf92A0A1B0GVN3 265 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 SEMA3DO95025 777 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 INHBAP08476 426 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 GDF1P27539 372 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 PIK3R1P27986 724 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 FBXW4P57775 412 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 GUCY1A3Q02108 690 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 BICRALQ6AI39 1079 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
UPK3A-201ENST00000216211 METTL2BQ6P1Q9 378 aaKnown RBP13.77□□□□□ -0.21
UPK3A-201ENST00000216211 RPS27LQ71UM5 84 aaKnown RBP13.77□□□□□ -0.21
UPK3A-201ENST00000216211 TMEM200AQ86VY9 491 aa13.77□□□□□ -0.21
UPK3A-201ENST00000216211 CLYBLQ8N0X4 340 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms