RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 ZBTB46Q86UZ6 589 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 COMTD1Q86VU5 262 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 PAQR7Q86WK9 346 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 VANGL1Q8TAA9 524 aaPredicted RBP17.09■□□□□ 0.33
USP18-201ENST00000215794 FKBP10Q96AY3 582 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 SRMSQ9H3Y6 488 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 ANKRA2Q9H9E1 313 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 SCN3BQ9NY72 215 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 PRAMEF26H0Y7S4 382 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 M0R129 80 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 ANXA8P13928 327 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 RHCEP18577 417 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 CCNA2P20248 432 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 GGT2P36268 569 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 KCNC4Q03721 635 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 ALG11Q2TAA5 492 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 PROX2Q3B8N5 592 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 MAMSTRQ6ZN01 415 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 CCDC81Q6ZN84 652 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 NRROSQ86YC3 692 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 LACC1Q8IV20 430 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 NLGN4XQ8N0W4 816 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 FLVCR1-AS1Q8TAF5 88 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 PHF10Q8WUB8 498 aaKnown RBP17.09■□□□□ 0.33
USP18-201ENST00000215794 PATE1Q8WXA2 126 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 MAPKAP1Q9BPZ7 522 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 TREX2Q9BQ50 279 aaPredicted RBP17.09■□□□□ 0.33
USP18-201ENST00000215794 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 SNX7Q9UNH6 387 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 POFUT2Q9Y2G5 429 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 SPAG17Q6Q759 2223 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 FANCMQ8IYD8 2048 aa17.09■□□□□ 0.33
USP18-201ENST00000215794 TRBV4-1A0A0J9YWV2 114 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 A6NCN8 305 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 ZNF99A8MXY4 864 aaPredicted RBP17.08■□□□□ 0.33
USP18-201ENST00000215794 ZW10O43264 779 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 CCNB2O95067 398 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 FADS2O95864 444 aaKnown RBP17.08■□□□□ 0.33
USP18-201ENST00000215794 WNT1P04628 370 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 HMGA2P52926 109 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 SRP54P61011 504 aaKnown RBP17.08■□□□□ 0.33
USP18-201ENST00000215794 BTN3A2P78410 334 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 DHRS4L2Q6PKH6 230 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 TMEM107Q6UX40 140 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 SLC16A12Q6ZSM3 486 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 AHSA2Q719I0 299 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 CCDC103Q8IW40 242 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 SFTPA2Q8IWL1 248 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 TBC1D19Q8N5T2 526 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 AQP11Q8NBQ7 271 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 TANKQ92844 425 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 ALPK1Q96QP1 1244 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 KLHL25Q9H0H3 589 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 P2RX2Q9UBL9 471 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 CES1P1Q9UKY3 287 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 SLC6A14Q9UN76 642 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 PCDHGB1Q9Y5G3 927 aa17.08■□□□□ 0.33
USP18-201ENST00000215794 NINQ8N4C6 2090 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 SCN3AQ9NY46 2000 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 TDRD6O60522 2096 aaKnown RBP17.08■□□□□ 0.32
USP18-201ENST00000215794 KDM1AO60341 852 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 NME6O75414 186 aaPredicted RBP17.08■□□□□ 0.32
USP18-201ENST00000215794 GASTP01350 101 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 THEGLP0DJG4 465 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 F3P13726 295 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 MAGP20916 626 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 IDH2P48735 452 aaKnown RBP17.08■□□□□ 0.32
USP18-201ENST00000215794 FUT5Q11128 374 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 BNIP3Q12983 259 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 AQP6Q13520 282 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 LASP1Q14847 261 aaKnown RBP17.08■□□□□ 0.32
USP18-201ENST00000215794 DEF8Q6ZN54 512 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 RAB2BQ8WUD1 216 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 PROX1Q92786 737 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 TCEAL2Q9H3H9 227 aaPredicted RBP17.08■□□□□ 0.32
USP18-201ENST00000215794 KCND3Q9UK17 655 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 PCOLCE2Q9UKZ9 415 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 HCN4Q9Y3Q4 1203 aa17.08■□□□□ 0.32
USP18-201ENST00000215794 HRO43593 1189 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 ZNF888P0CJ79 500 aaPredicted RBP17.07■□□□□ 0.32
USP18-201ENST00000215794 CBLP22681 906 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 AVPR2P30518 371 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 KCNJ5P48544 419 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 TCTN3Q6NUS6 607 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 SLC48A1Q6P1K1 146 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 PARP8Q8N3A8 854 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 OR10G6Q8NH81 332 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 UTP15Q8TED0 518 aaKnown RBP17.07■□□□□ 0.32
USP18-201ENST00000215794 C16orf58Q96GQ5 468 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 NMNAT1Q9HAN9 279 aaPredicted RBP17.07■□□□□ 0.32
USP18-201ENST00000215794 AMBNQ9NP70 447 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 DNAAF2Q9NVR5 837 aaKnown RBP17.07■□□□□ 0.32
USP18-201ENST00000215794 SEC14L3Q9UDX4 400 aa17.07■□□□□ 0.32
USP18-201ENST00000215794 PROM1O43490 865 aa17.06■□□□□ 0.32
USP18-201ENST00000215794 RGS10O43665 173 aa17.06■□□□□ 0.32
USP18-201ENST00000215794 PFDN1O60925 122 aa17.06■□□□□ 0.32
USP18-201ENST00000215794 HMGN2P05204 90 aaKnown RBP17.06■□□□□ 0.32
USP18-201ENST00000215794 NR2F1P10589 423 aa17.06■□□□□ 0.32
USP18-201ENST00000215794 POLR2CP19387 275 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms