RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Lrrc14bQ3UJB3 510 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Zc3h14Q8BJ05 735 aaKnown RBP17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 A26c2A0A140LHE4 291 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Nxf3Q4ZGD9 553 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Gm156Q58A37 223 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Defb34Q7TNV8 81 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Ptrh1Q8BW00 204 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Slc22a12Q8CFZ5 553 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Adgrg2Q8CJ12 1009 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Tm9sf3Q9ET30 587 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Gm20441G3UYJ7 252 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 KitlgP20826 273 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Bmp7P23359 430 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Timm8a2Q4FZG7 97 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Q91Z58 1206 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Vmn2r19G5E8G4 854 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Ccm2lQ8VCC6 481 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Olfr214Q8VG27 320 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 AspnQ99MQ4 373 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Tmem39aQ9CYC3 486 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Pag1Q3U1F9 429 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Tmem41bQ8K1A5 291 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Il34Q8R1R4 235 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Gtpbp3Q923K4 492 aa17.71■□□□□ 0.43
Trim71-201ENSMUST00000111816 Cntnap5cQ0V8T7 1305 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm17949A0A1B0GRV7 212 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm21904A8HG57 180 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Enthd1E9Q1Z2 618 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm21866J3QMH4 180 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Ube2kP61087 200 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 LchnQ3UHG7 455 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Lrit2Q6PFC5 549 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Trim46Q7TNM2 759 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Zcchc3Q8BPK2 400 aaKnown RBP17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Adhfe1Q8R0N6 465 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Ndufs4Q9CXZ1 175 aa17.71■□□□□ 0.42
Trim71-201ENSMUST00000111816 Ddx60E9PZQ1 1711 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 0610012G03RikA0A0J9YTR2 95 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm45713A0A1B0GS68 446 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Tulp2P46686 562 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Mon1bQ8BMQ8 553 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Q8K039 155 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Dcaf8Q8N7N5 591 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr167Q8VGJ5 312 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Thumpd1Q99J36 350 aaKnown RBP17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Slco1a6Q99J94 670 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Magi3Q9EQJ9 1476 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm6133B2RY53 190 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Phf11cB4XVP9 339 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Nfatc3P97305 1075 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Tatdn1Q6P8M1 295 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Vash1Q8C1W1 375 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr1310Q8VF85 312 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Q9CRC3 126 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr705Q9EPF7 316 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Vmn2r59E9PUT5 865 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 EdnrbP48302 442 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Xkr5Q5GH66 676 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 C2cd4cC2CD4Q5HZI2 419 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Rxfp3Q8BGE9 472 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Lmtk3Q5XJV6 1424 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr596F8VQ26 312 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Zfp37P17141 594 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Arhgap39P59281 1107 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 P2rx3Q3UR32 397 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Fam173aQ501J2 229 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Eif2dQ61211 570 aaKnown RBP17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 RgnQ64374 299 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gfm1Q8K0D5 751 aaKnown RBP17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Glis1Q8K1M4 789 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Uqcrc2Q9DB77 453 aaKnown RBP17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Obp1bA2AEP0 171 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm14743A2BHD2 171 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Zfp169E9Q3R6 731 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Kcna7Q17ST2 489 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Dag1Q62165 893 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Nceh1Q8BLF1 408 aaKnown RBP17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Dkkl1Q9QZL9 230 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Fer1l6E0CZ42 1862 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 TncQ80YX1 2110 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm34653A0A1L1SR01 368 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Slc45a4Q0P5V9 785 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Vmn1r222Q8R269 308 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Edem1Q925U4 652 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Scn4bQ7M729 228 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 9130023H24RikQ8BG98 337 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr472Q8VG43 310 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Ptpn23Q6PB44 1692 aa17.7■□□□□ 0.42
Trim71-201ENSMUST00000111816 Vmn2r24D3YUI0 854 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Gm21834J3QN05 151 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Kcnk2P97438 426 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr320Q7TRZ4 306 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Nipal4Q8BZF2 406 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr592E9PYB3 312 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Dnase1l3O55070 310 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Il12aP43431 215 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Lingo4Q149C3 593 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Commd3Q63829 195 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Ranbp3lQ6PDH4 491 aa17.69■□□□□ 0.42
Trim71-201ENSMUST00000111816 Olfr1031Q7TR87 336 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms